RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 PPP2R5BQ15173 497 aa18.35■□□□□ 0.53
CDPF1-204ENST00000404744 RTN1Q16799 776 aa18.35■□□□□ 0.53
CDPF1-204ENST00000404744 PRRT2Q7Z6L0 340 aaPredicted RBP18.35■□□□□ 0.53
CDPF1-204ENST00000404744 FANCBQ8NB91 859 aa18.35■□□□□ 0.53
CDPF1-204ENST00000404744 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
CDPF1-204ENST00000404744 C12orf42Q96LP6 360 aa18.35■□□□□ 0.53
CDPF1-204ENST00000404744 RBM28Q9NW13 759 aaKnown RBP18.35■□□□□ 0.53
CDPF1-204ENST00000404744 CD2BP2O95400 341 aaKnown RBP18.34■□□□□ 0.53
CDPF1-204ENST00000404744 CCT2P78371 535 aaKnown RBP18.34■□□□□ 0.53
CDPF1-204ENST00000404744 IKQ13123 557 aaPredicted RBP18.34■□□□□ 0.53
CDPF1-204ENST00000404744 BECN1Q14457 450 aa18.34■□□□□ 0.53
CDPF1-204ENST00000404744 GRM4Q14833 912 aa18.34■□□□□ 0.53
CDPF1-204ENST00000404744 ME3Q16798 604 aa18.34■□□□□ 0.53
CDPF1-204ENST00000404744 ASPRV1Q53RT3 343 aa18.34■□□□□ 0.53
CDPF1-204ENST00000404744 GPATCH4Q5T3I0 446 aaKnown RBP18.34■□□□□ 0.53
CDPF1-204ENST00000404744 PHIPQ8WWQ0 1821 aa18.34■□□□□ 0.53
CDPF1-204ENST00000404744 RASSF10A6NK89 507 aa18.33■□□□□ 0.53
CDPF1-204ENST00000404744 DHX16O60231 1041 aaKnown RBP18.33■□□□□ 0.53
CDPF1-204ENST00000404744 PFKFB2O60825 505 aa18.33■□□□□ 0.53
CDPF1-204ENST00000404744 SNHG28P0DPA3 235 aa18.33■□□□□ 0.53
CDPF1-204ENST00000404744 HTRA3P83110 453 aa18.33■□□□□ 0.53
CDPF1-204ENST00000404744 DGKZQ13574 1117 aa18.33■□□□□ 0.53
CDPF1-204ENST00000404744 FAM83BQ5T0W9 1011 aa18.33■□□□□ 0.53
CDPF1-204ENST00000404744 FRMPD2Q68DX3 1309 aaPredicted RBP18.33■□□□□ 0.53
CDPF1-204ENST00000404744 CPLX2Q6PUV4 134 aaKnown RBP18.33■□□□□ 0.53
CDPF1-204ENST00000404744 KCTD1Q719H9 257 aa18.33■□□□□ 0.53
CDPF1-204ENST00000404744 NUP88Q99567 741 aaPredicted RBP18.33■□□□□ 0.53
CDPF1-204ENST00000404744 GPCPD1Q9NPB8 672 aa18.33■□□□□ 0.53
CDPF1-204ENST00000404744 CCL15-CCL14A0A0B4J2E2 113 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 MANSC4A6NHS7 340 aaPredicted RBP18.33■□□□□ 0.52
CDPF1-204ENST00000404744 CPLX1O14810 134 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 GOLGA8HP0CJ92 632 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 VCAM1P19320 739 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 ZNF543Q08ER8 600 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 PABPC4Q13310 644 aaKnown RBP eCLIP18.33■□□□□ 0.52
CDPF1-204ENST00000404744 CCL15Q16663 113 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 KIAA1755Q5JYT7 1200 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 CYP4F22Q6NT55 531 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 TANGO6Q9C0B7 1094 aa18.33■□□□□ 0.52
CDPF1-204ENST00000404744 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L15C9J2P7 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L13C9JLJ4 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 TMEM232C9JQI7 657 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L11C9JVI0 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 KLRF2D3W0D1 207 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L18D6R9N7 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L22D6RA61 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L17D6RBQ6 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L19D6RCP7 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L20D6RJB6 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 K7ELQ4 463 aaPredicted RBP18.32■□□□□ 0.52
CDPF1-204ENST00000404744 USP17L24Q0WX57 530 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 DNAJC5GQ8N7S2 189 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 NECAB1Q8N987 351 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 CHURC1Q8WUH1 139 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 LZTS2Q9BRK4 669 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 FEM1BQ9UK73 627 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 HPS5Q9UPZ3 1129 aa18.32■□□□□ 0.52
CDPF1-204ENST00000404744 RBM19Q9Y4C8 960 aaKnown RBP18.32■□□□□ 0.52
CDPF1-204ENST00000404744 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
CDPF1-204ENST00000404744 FAM155AB1AL88 458 aaPredicted RBP18.31■□□□□ 0.52
CDPF1-204ENST00000404744 LARGE1O95461 756 aa18.31■□□□□ 0.52
CDPF1-204ENST00000404744 INHBEP58166 350 aa18.31■□□□□ 0.52
CDPF1-204ENST00000404744 SCRN1Q12765 414 aa18.31■□□□□ 0.52
CDPF1-204ENST00000404744 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
CDPF1-204ENST00000404744 RASGRP2Q7LDG7 609 aa18.31■□□□□ 0.52
CDPF1-204ENST00000404744 MS4A4AQ96JQ5 239 aa18.31■□□□□ 0.52
CDPF1-204ENST00000404744 CAPNS2Q96L46 248 aa18.31■□□□□ 0.52
CDPF1-204ENST00000404744 NCOA5Q9HCD5 579 aaKnown RBP18.31■□□□□ 0.52
CDPF1-204ENST00000404744 AGTPBP1Q9UPW5 1226 aa18.31■□□□□ 0.52
CDPF1-204ENST00000404744 OSBPP22059 807 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 ADD1P35611 737 aaKnown RBP18.3■□□□□ 0.52
CDPF1-204ENST00000404744 STAT2P52630 851 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 SREBF2Q12772 1141 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 NOGQ13253 232 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 FAM160B2Q86V87 743 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 CCDC83Q8IWF9 413 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 STAG2Q8N3U4 1231 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 GTF3C6Q969F1 213 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 NID2Q14112 1375 aa18.3■□□□□ 0.52
CDPF1-204ENST00000404744 FLOT1O75955 427 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 CDKL5O76039 1030 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 CDC27P30260 824 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 TREML2Q5T2D2 321 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 TTBK2Q6IQ55 1244 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
CDPF1-204ENST00000404744 DAXXQ9UER7 740 aaPredicted RBP18.29■□□□□ 0.52
CDPF1-204ENST00000404744 CTDP1Q9Y5B0 961 aaPredicted RBP18.29■□□□□ 0.52
CDPF1-204ENST00000404744 PLA2G6O60733 806 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 HSP90AA1P07900 732 aaKnown RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 SLC16A2P36021 539 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 IRX3P78415 501 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 TMTC3Q6ZXV5 915 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 KIFC2Q96AC6 838 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms