RNA–Protein interactions for RNA: ENST00000403821.6

R3HDM2-205, Transcript of R3H domain containing 2, humanhuman

TSL 5 BASIC

Gene R3HDM2, Length 3,347 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-205ENST00000403821 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
R3HDM2-205ENST00000403821 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
R3HDM2-205ENST00000403821 DEXIO95424 95 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 UBXN1Q04323 297 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 TTF1Q15361 905 aaPredicted RBP12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 CCDC122Q5T0U0 273 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 SUSD4Q5VX71 490 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 GSPT2Q8IYD1 628 aaKnown RBP12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 ZNF579Q8NAF0 562 aaKnown RBP12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 GREM2Q9H772 168 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 EPN1Q9Y6I3 576 aaPredicted RBP12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 STK36Q9NRP7 1315 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 MBD4O95243 580 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 IPO7O95373 1038 aaKnown RBP12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 XBP1P17861 261 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 CORO7P57737 925 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 CHP1Q99653 195 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 VPS54Q9P1Q0 977 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 A0A087X0B3 334 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 CCDC196A0A1B0GTZ2 297 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 RPS6KA5O75582 802 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 MCM3P25205 808 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 ARHGAP25P42331 645 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 LIFRP42702 1097 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 COPB1P53618 953 aaKnown RBP12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 CUL4BQ13620 913 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 ZNF174Q15697 407 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 CDKAL1Q5VV42 579 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 ARMT1Q9H993 441 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 MYO1AQ9UBC5 1043 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 TFR2Q9UP52 801 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 TJP1Q07157 1748 aa12.47□□□□□ -0.41
R3HDM2-205ENST00000403821 IRS4O14654 1257 aaPredicted RBP12.46□□□□□ -0.41
R3HDM2-205ENST00000403821 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
R3HDM2-205ENST00000403821 SAR1BQ9Y6B6 198 aa12.46□□□□□ -0.41
R3HDM2-205ENST00000403821 RNF225M0QZC1 329 aaPredicted RBP12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 PBX1P40424 430 aa12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 USP14P54578 494 aa12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 ZBTB38Q8NAP3 1195 aaPredicted RBP12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 FAM76AQ8TAV0 307 aa12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 GSDMAQ96QA5 445 aa12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 MMS19Q96T76 1030 aa12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 NIP7Q9Y221 180 aaKnown RBP eCLIP12.46□□□□□ -0.42
R3HDM2-205ENST00000403821 NDUFA10O95299 355 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 SPAG1Q07617 926 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 CCDC70Q6NSX1 233 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 IFNL3Q8IZI9 196 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 KRT23Q9C075 422 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 KCNJ18B7U540 433 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 PPP1R3GB7ZBB8 358 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 PRDM1O75626 825 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 TRIM37O94972 964 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 PHKA1P46020 1223 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 CCT5P48643 541 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 LIG3P49916 1009 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 KCNJ12Q14500 433 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 E2F4Q16254 413 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 AKNAD1Q5T1N1 836 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 CRACR2BQ8N4Y2 399 aaPredicted RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 MAGEB6Q8N7X4 407 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 PCMTD1Q96MG8 357 aaPredicted RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 STRBPQ96SI9 672 aaKnown RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 JADE2Q9NQC1 790 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 AATFQ9NY61 560 aaKnown RBP eCLIP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 CCNL1Q9UK58 526 aaPredicted RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 TRPC5Q9UL62 973 aaPredicted RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 GNPATO15228 680 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 ATP1A1P05023 1023 aaKnown RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 GGCXP38435 758 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 DPYDQ12882 1025 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 PAK1Q13153 545 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 WDR93Q6P2C0 686 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 HPCAL4Q9UM19 191 aa12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 LUC7L2Q9Y383 392 aaKnown RBP12.45□□□□□ -0.42
R3HDM2-205ENST00000403821 GOLGA6CA6NDK9 693 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 GOLGA6DP0CG33 693 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 EFCAB13Q8IY85 973 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 GPATCH11Q8N954 259 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 SPATA20Q8TB22 786 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 NELFBQ8WX92 580 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 GOLGA6AQ9NYA3 693 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 SEMA3EO15041 775 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 SYF2O95926 243 aaKnown RBP12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 PCCAP05165 728 aaPredicted RBP12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 ITGA6P23229 1130 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 AMPD2Q01433 879 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 CKAP4Q07065 602 aaKnown RBP12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 TRIM14Q14142 442 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 TADA2BQ86TJ2 420 aa12.44□□□□□ -0.42
R3HDM2-205ENST00000403821 ZNF654Q8IZM8 581 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms