RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 SPZ1Q9BXG8 430 aa22.52■■□□□ 1.2
AC008060.1-201ENST00000401499 GINM1Q9NU53 330 aa22.52■■□□□ 1.2
AC008060.1-201ENST00000401499 TCHHQ07283 1943 aa22.52■■□□□ 1.2
AC008060.1-201ENST00000401499 NDUFB10O96000 172 aa22.51■■□□□ 1.19
AC008060.1-201ENST00000401499 DCAF4Q8WV16 495 aa22.51■■□□□ 1.19
AC008060.1-201ENST00000401499 ZKSCAN4Q969J2 545 aaPredicted RBP22.51■■□□□ 1.19
AC008060.1-201ENST00000401499 CDCA5Q96FF9 252 aa22.51■■□□□ 1.19
AC008060.1-201ENST00000401499 GPCPD1Q9NPB8 672 aa22.51■■□□□ 1.19
AC008060.1-201ENST00000401499 USP2O75604 605 aaPredicted RBP22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 BAG4O95429 457 aaKnown RBP22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 AKAP17AQ02040 695 aaKnown RBP22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 RESTQ13127 1097 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 KIAA1755Q5JYT7 1200 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 KRT40Q6A162 431 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 KCTD1Q719H9 257 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 SCYL3Q8IZE3 742 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 RGS22Q8NE09 1264 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 PIBF1Q8WXW3 757 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 UBA5Q9GZZ9 404 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 RRAGCQ9HB90 399 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 RAD21O60216 631 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 VEGFAP15692 232 aaPredicted RBP22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 SMARCA1P28370 1054 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 PRKG1Q13976 671 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 NFKBIBQ15653 356 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 CCDC96Q2M329 555 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 GPATCH4Q5T3I0 446 aaKnown RBP22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 TTBK2Q6IQ55 1244 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 GMCL1Q96IK5 515 aa22.5■■□□□ 1.19
AC008060.1-201ENST00000401499 DCAF8L1A6NGE4 600 aa22.49■■□□□ 1.19
AC008060.1-201ENST00000401499 SLC1A4P43007 532 aa22.49■■□□□ 1.19
AC008060.1-201ENST00000401499 PFKFB3Q16875 520 aaPredicted RBP22.49■■□□□ 1.19
AC008060.1-201ENST00000401499 FOXD4L6Q3SYB3 417 aaPredicted RBP22.49■■□□□ 1.19
AC008060.1-201ENST00000401499 FOXD4L3Q6VB84 417 aaPredicted RBP22.49■■□□□ 1.19
AC008060.1-201ENST00000401499 NUP88Q99567 741 aaPredicted RBP22.49■■□□□ 1.19
AC008060.1-201ENST00000401499 RIOX1Q9H6W3 641 aa22.49■■□□□ 1.19
AC008060.1-201ENST00000401499 SCG2P13521 617 aa22.47■■□□□ 1.19
AC008060.1-201ENST00000401499 NOL9Q5SY16 702 aaKnown RBP22.47■■□□□ 1.19
AC008060.1-201ENST00000401499 SPICE1Q8N0Z3 855 aa22.47■■□□□ 1.19
AC008060.1-201ENST00000401499 GBP4Q96PP9 640 aa22.47■■□□□ 1.19
AC008060.1-201ENST00000401499 VCPKMTQ9H867 229 aa22.47■■□□□ 1.19
AC008060.1-201ENST00000401499 VPS54Q9P1Q0 977 aa22.47■■□□□ 1.19
AC008060.1-201ENST00000401499 RBM27Q9P2N5 1060 aaKnown RBP22.47■■□□□ 1.19
AC008060.1-201ENST00000401499 KCNJ14Q9UNX9 436 aa22.47■■□□□ 1.19
AC008060.1-201ENST00000401499 ZYXQ15942 572 aaKnown RBP22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 FAM173BQ6P4H8 233 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 SH2D4AQ9H788 454 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 GOPCQ9HD26 462 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 CLEC11AQ9Y240 323 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 KIF28PB7ZC32 967 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 PTPRAP18433 802 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 MCM4P33991 863 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 SLC16A2P36021 539 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 KIF23Q02241 960 aaPredicted RBP22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 TRIM29Q14134 588 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 MAP1SQ66K74 1059 aaPredicted RBP22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 MCTP1Q6DN14 999 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 PIGSQ96S52 555 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 VAT1LQ9HCJ6 419 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 NMRK2Q9NPI5 230 aa22.46■■□□□ 1.19
AC008060.1-201ENST00000401499 MMP1P03956 469 aa22.45■■□□□ 1.18
AC008060.1-201ENST00000401499 BMP3P12645 472 aa22.45■■□□□ 1.18
AC008060.1-201ENST00000401499 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.45■■□□□ 1.18
AC008060.1-201ENST00000401499 ADGRF4Q8IZF3 695 aa22.45■■□□□ 1.18
AC008060.1-201ENST00000401499 GPKOWQ92917 476 aaPredicted RBP eCLIP22.45■■□□□ 1.18
AC008060.1-201ENST00000401499 ZSCAN16Q9H4T2 348 aaPredicted RBP22.45■■□□□ 1.18
AC008060.1-201ENST00000401499 JMJD4Q9H9V9 463 aa22.45■■□□□ 1.18
AC008060.1-201ENST00000401499 ISY1Q9ULR0 285 aaKnown RBP22.45■■□□□ 1.18
AC008060.1-201ENST00000401499 WWC2Q6AWC2 1192 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 HOMER1Q86YM7 354 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 RRP36Q96EU6 259 aaKnown RBP22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 FEZ1Q99689 392 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 WDR18Q9BV38 432 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 PHF20Q9BVI0 1012 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 KIAA1683Q9H0B3 1180 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 PICK1Q9NRD5 415 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 ATP6V1DQ9Y5K8 247 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 SNCAIPQ9Y6H5 919 aa22.44■■□□□ 1.18
AC008060.1-201ENST00000401499 PPP1R12BO60237 982 aaPredicted RBP22.43■■□□□ 1.18
AC008060.1-201ENST00000401499 MAP3K9P80192 1104 aa22.43■■□□□ 1.18
AC008060.1-201ENST00000401499 DNM1Q05193 864 aaKnown RBP22.43■■□□□ 1.18
AC008060.1-201ENST00000401499 DGKZQ13574 1117 aa22.43■■□□□ 1.18
AC008060.1-201ENST00000401499 VGLL4Q14135 290 aa22.43■■□□□ 1.18
AC008060.1-201ENST00000401499 FAM83BQ5T0W9 1011 aa22.43■■□□□ 1.18
AC008060.1-201ENST00000401499 TYW1BQ6NUM6 668 aa22.43■■□□□ 1.18
AC008060.1-201ENST00000401499 MTMR8Q96EF0 704 aa22.43■■□□□ 1.18
AC008060.1-201ENST00000401499 USP17L10C9JJH3 530 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 TMEM232C9JQI7 657 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 NF2P35240 595 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 NPY5RQ15761 445 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 MOB2Q70IA6 237 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 ZNF526Q8TF50 670 aaPredicted RBP22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 PTPRFP10586 1907 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 TRAF5O00463 557 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 XBP1P17861 261 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 FMR1Q06787 632 aaKnown RBP eCLIP22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 MTMR2Q13614 643 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 BTNL9Q6UXG8 535 aa22.42■■□□□ 1.18
AC008060.1-201ENST00000401499 AS3MTQ9HBK9 375 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms