RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CEP57Q86XR8 500 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 NAA15Q9BXJ9 866 aaKnown RBP19.18■□□□□ 0.66
PTPRA-205ENST00000399903 RIC1Q4ADV7 1423 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 MYO1BO43795 1136 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 IL6STP40189 918 aaPredicted RBP19.18■□□□□ 0.66
PTPRA-205ENST00000399903 RRP36Q96EU6 259 aaKnown RBP19.18■□□□□ 0.66
PTPRA-205ENST00000399903 MAP3K14Q99558 947 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 BLZF1Q9H2G9 400 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 BCAMP50895 628 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 TSR1Q2NL82 804 aaKnown RBP19.18■□□□□ 0.66
PTPRA-205ENST00000399903 SH2D3CQ8N5H7 860 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 NBPF3Q9H094 633 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 PCDHB6Q9Y5E3 794 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 MORC3Q14149 939 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 TMTC1Q8IUR5 882 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 DIS3L2Q8IYB7 885 aaKnown RBP19.17■□□□□ 0.66
PTPRA-205ENST00000399903 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 ATP2C2O75185 946 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 PPARAQ07869 468 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 ACTN3Q08043 901 aaPredicted RBP19.17■□□□□ 0.66
PTPRA-205ENST00000399903 CLGNO14967 610 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 ZBTB43O43298 467 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 CDKL5O76039 1030 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 SCP2P22307 547 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 CYP26C1Q6V0L0 522 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 EPSTI1Q96J88 318 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 PCMTD1Q96MG8 357 aaPredicted RBP19.17■□□□□ 0.66
PTPRA-205ENST00000399903 ZNF532Q9HCE3 1301 aa19.17■□□□□ 0.66
PTPRA-205ENST00000399903 ROBO1Q9Y6N7 1651 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 SPATA1Q5VX52 437 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 C3orf67Q6ZVT6 689 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 JAKMIP2Q96AA8 810 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 ZKSCAN3Q9BRR0 538 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 PLA2G12BQ9BX93 195 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 CSRNP2Q9H175 543 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 ABHD10Q9NUJ1 306 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 CPP00450 1065 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 ARHGAP25P42331 645 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 MDM2Q00987 491 aaPredicted RBP19.16■□□□□ 0.66
PTPRA-205ENST00000399903 UBXN1Q04323 297 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 TUBB2AQ13885 445 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 EZH2Q15910 746 aaKnown RBP19.16■□□□□ 0.66
PTPRA-205ENST00000399903 MB21D2Q8IYB1 491 aaPredicted RBP19.16■□□□□ 0.66
PTPRA-205ENST00000399903 ZNF34Q8IZ26 560 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 TUBB2BQ9BVA1 445 aa19.16■□□□□ 0.66
PTPRA-205ENST00000399903 ADD3Q9UEY8 706 aaKnown RBP19.16■□□□□ 0.66
PTPRA-205ENST00000399903 ANGEL1Q9UNK9 670 aaKnown RBP19.16■□□□□ 0.66
PTPRA-205ENST00000399903 EPN1Q9Y6I3 576 aaPredicted RBP19.16■□□□□ 0.66
PTPRA-205ENST00000399903 ITGB4P16144 1822 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 GUCY1A2P33402 732 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 RRAGBQ5VZM2 374 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 MIGA1Q8NAN2 632 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 NUP133Q8WUM0 1156 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 APPBP2Q92624 585 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 CABP5Q9NP86 173 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 TUBBP07437 444 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 TUBB4BP68371 445 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 SWT1Q5T5J6 900 aaKnown RBP19.15■□□□□ 0.66
PTPRA-205ENST00000399903 CCDC70Q6NSX1 233 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 WDR93Q6P2C0 686 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 hCG_1642624A0A1W2PR95 340 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 PPFIA1Q13136 1202 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 CYB5R4Q7L1T6 521 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 SLC51AQ86UW1 340 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 VGLL2Q8N8G2 317 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 JAG2Q9Y219 1238 aa19.15■□□□□ 0.66
PTPRA-205ENST00000399903 IDEP14735 1019 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 SSRP1Q08945 709 aaKnown RBP19.14■□□□□ 0.65
PTPRA-205ENST00000399903 TMEM67Q5HYA8 995 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 POTEDQ86YR6 584 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 NOSTRINQ8IVI9 506 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 PRKAB2O43741 272 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 CABS1Q96KC9 395 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 SMARCAL1Q9NZC9 954 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.65
PTPRA-205ENST00000399903 AGPSO00116 658 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 MCM3P25205 808 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 SF3A3Q12874 501 aaKnown RBP eCLIP19.13■□□□□ 0.659e-7■■■□□ 18.6
PTPRA-205ENST00000399903 RASGRF1Q13972 1273 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 HDAC7Q8WUI4 952 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 SMIM22K7EJ46 135 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 CAMTA2O94983 1202 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 CXCR5P32302 372 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 PPP2R5AQ15172 486 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 KRT31Q15323 416 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 APOA5Q6Q788 366 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 ARL8AQ96BM9 186 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 ARMT1Q9H993 441 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 ABCF2Q9UG63 623 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 NDUFA10O95299 355 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 IPO7O95373 1038 aaKnown RBP19.13■□□□□ 0.65
PTPRA-205ENST00000399903 MMP14P50281 582 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 KIRREL3Q8IZU9 778 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 CTAGE1Q96RT6 745 aa19.13■□□□□ 0.65
PTPRA-205ENST00000399903 ZMYM6O95789 1325 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 EIF3HO15372 352 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTPRA-205ENST00000399903 PDE6AP16499 860 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 AARSP49588 968 aaKnown RBP eCLIP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms