RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 AACSQ86V21 672 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 MORC2Q9Y6X9 1032 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 MLECQ14165 292 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 CAPRIN2Q6IMN6 1127 aaKnown RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 SND1Q7KZF4 910 aaKnown RBP eCLIP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 TRMT10CQ7L0Y3 403 aaKnown RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 DDI1Q8WTU0 396 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 NAPGQ99747 312 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 BAG3O95817 575 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 SCG2P13521 617 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 DPH6Q7L8W6 267 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 HELLSQ9NRZ9 838 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 GUCA1BQ9UMX6 200 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 TRPA1O75762 1119 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 RINLQ6ZS11 566 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 TNPO1Q92973 898 aaKnown RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 UBXN1Q04323 297 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 TP53BP2Q13625 1128 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 CLEC4MQ9H2X3 399 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 CHEK2O96017 543 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 SPDYE16A6NNV3 312 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 SPDYE2Q495Y8 402 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 FBXO18Q8NFZ0 1043 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 RSAD2Q8WXG1 361 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 SOX13Q9UN79 622 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 RHOXF2BP0C7M4 288 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 STX12Q86Y82 276 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 SCYL3Q8IZE3 742 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 RHOXF2Q9BQY4 288 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 PRDM5Q9NQX1 630 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 HMG20BQ9P0W2 317 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 APBA1Q02410 837 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 PDE3AQ14432 1141 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 SUZ12Q15022 739 aaKnown RBP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 ACRBPQ8NEB7 543 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 STAMQ92783 540 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 FRMD3A2A2Y4 597 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 KLC3Q6P597 504 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 IL9RQ01113 521 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 CCT7Q99832 543 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 CLSTN2Q9H4D0 955 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 RUNX1T1Q06455 604 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 NFE2L2Q16236 605 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 SIX6OS1Q8N1H7 587 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 CLCN1P35523 988 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 GNAQP50148 359 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 SLC10A5Q5PT55 438 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 SNX30Q5VWJ9 437 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 CHMP2BQ9UQN3 213 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 SELENONQ9NZV5 590 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 TRIM13O60858 407 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 ECEL1O95672 775 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 MRPS35P82673 323 aaKnown RBP9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 RRAGBQ5VZM2 374 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 OLFML3Q9NRN5 406 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 A0A1B0GVL5 298 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 DYNC1LI2O43237 492 aaPredicted RBP9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 ARID5AQ03989 594 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 ZSCAN26Q16670 478 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 CABP5Q9NP86 173 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 MID2Q9UJV3 735 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 EXOC7Q9UPT5 735 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 TRPC6Q9Y210 931 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 CCDC88CQ9P219 2028 aa9.38□□□□□ -0.91
CACNA1C-220ENST00000399655 TRIM27P14373 513 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 EIF2S3P41091 472 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 ZFYVE19Q96K21 471 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 ECT2Q9H8V3 914 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 GRK2P25098 689 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 SLC44A4Q53GD3 710 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 PARP10Q53GL7 1025 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 CERS3Q8IU89 383 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 IRAK4Q9NWZ3 460 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 THAP12O43422 761 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 RWDD2BP57060 319 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 CCDC13Q8IYE1 715 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 GOLGA8JA6NMD2 632 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 PPARGP37231 505 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 MMRN1Q13201 1228 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 BLOC1S6Q9UL45 172 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 WBP11Q9Y2W2 641 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 TRIM37O94972 964 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 RPN1P04843 607 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 NBPF9Q3BBW0 867 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 RNF217Q8TC41 542 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 RECQLP46063 649 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 KRT40Q6A162 431 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 STRIP2Q9ULQ0 834 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 NUP155O75694 1391 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 A0A087WUV0 522 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms