RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CPLX3Q8WVH0 158 aa29■■■□□ 2.23
COL13A1-203ENST00000398969 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29■■■□□ 2.23
COL13A1-203ENST00000398969 MFAP3LO75121 409 aa28.99■■■□□ 2.23
COL13A1-203ENST00000398969 SEC31AO94979 1220 aaKnown RBP28.99■■■□□ 2.23
COL13A1-203ENST00000398969 FILIP1LQ4L180 1135 aa28.99■■■□□ 2.23
COL13A1-203ENST00000398969 IRX2Q9BZI1 471 aaPredicted RBP28.99■■■□□ 2.23
COL13A1-203ENST00000398969 USP17L12C9JPN9 530 aa28.99■■■□□ 2.23
COL13A1-203ENST00000398969 USP17L21D6R901 530 aa28.99■■■□□ 2.23
COL13A1-203ENST00000398969 TEX35Q5T0J7 233 aa28.99■■■□□ 2.23
COL13A1-203ENST00000398969 STAMQ92783 540 aa28.99■■■□□ 2.23
COL13A1-203ENST00000398969 FAM84BQ96KN1 310 aaPredicted RBP28.98■■■□□ 2.23
COL13A1-203ENST00000398969 BSDC1Q9NW68 430 aaPredicted RBP28.98■■■□□ 2.23
COL13A1-203ENST00000398969 CTNND2Q9UQB3 1225 aa28.98■■■□□ 2.23
COL13A1-203ENST00000398969 ATP8B1O43520 1251 aa28.97■■■□□ 2.23
COL13A1-203ENST00000398969 NBPF5PQ86XG9 351 aaPredicted RBP28.97■■■□□ 2.23
COL13A1-203ENST00000398969 CTCFLQ8NI51 663 aaPredicted RBP28.97■■■□□ 2.23
COL13A1-203ENST00000398969 LZTFL1Q9NQ48 299 aa28.97■■■□□ 2.23
COL13A1-203ENST00000398969 EVX2Q03828 476 aa28.97■■■□□ 2.23
COL13A1-203ENST00000398969 IQUBQ8NA54 791 aa28.97■■■□□ 2.23
COL13A1-203ENST00000398969 LRRC4BQ9NT99 713 aa28.97■■■□□ 2.23
COL13A1-203ENST00000398969 ORC4O43929 436 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 NMT2O60551 498 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 CASP14P31944 242 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 COL24A1Q17RW2 1714 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 CC2D1AQ6P1N0 951 aaPredicted RBP28.96■■■□□ 2.23
COL13A1-203ENST00000398969 CREBRFQ8IUR6 639 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 RABGGTAQ92696 567 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 BLZF1Q9H2G9 400 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 MINPP1Q9UNW1 487 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 CASZ1Q86V15 1759 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 ITIH6Q6UXX5 1313 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 TRAPPC3LQ5T215 181 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 PDXDC2PQ6P474 469 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 TAF1P21675 1872 aa28.96■■■□□ 2.23
COL13A1-203ENST00000398969 A0A0U1RQJ8 604 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 GYPCP04921 128 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 SCG2P13521 617 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 TRAPPC10P48553 1259 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 FAM196AQ6ZSG2 479 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 PIK3AP1Q6ZUJ8 805 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 CNGA4Q8IV77 575 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 ATRIPQ8WXE1 791 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 GOLGA1Q92805 767 aa28.95■■■□□ 2.23
COL13A1-203ENST00000398969 RFC4P35249 363 aa28.95■■■□□ 2.22
COL13A1-203ENST00000398969 TPTE2Q6XPS3 522 aa28.95■■■□□ 2.22
COL13A1-203ENST00000398969 RASGRP2Q7LDG7 609 aa28.95■■■□□ 2.22
COL13A1-203ENST00000398969 NSUN4Q96CB9 384 aaKnown RBP28.95■■■□□ 2.22
COL13A1-203ENST00000398969 TBC1D8O95759 1140 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 FECHP22830 423 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 NLRP5P59047 1200 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 IL17AQ16552 155 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 CCDC51Q96ER9 411 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 COBLO75128 1261 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 FXR1P51114 621 aaKnown RBP eCLIP28.94■■■□□ 2.22
COL13A1-203ENST00000398969 RRAGBQ5VZM2 374 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 NLRP3Q96P20 1036 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 MTRQ99707 1265 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 PARD6BQ9BYG5 372 aa28.94■■■□□ 2.22
COL13A1-203ENST00000398969 LIMA1Q9UHB6 759 aaKnown RBP28.94■■■□□ 2.22
COL13A1-203ENST00000398969 KRT31Q15323 416 aa28.93■■■□□ 2.22
COL13A1-203ENST00000398969 FAM47AQ5JRC9 791 aa28.93■■■□□ 2.22
COL13A1-203ENST00000398969 PYM1Q9BRP8 204 aaKnown RBP28.93■■■□□ 2.22
COL13A1-203ENST00000398969 DCP1AQ9NPI6 582 aaPredicted RBP28.93■■■□□ 2.22
COL13A1-203ENST00000398969 RWDD2AQ9UIY3 292 aa28.93■■■□□ 2.22
COL13A1-203ENST00000398969 GTPBP6O43824 516 aaPredicted RBP28.92■■■□□ 2.22
COL13A1-203ENST00000398969 KIF5CO60282 957 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 SASH3O75995 380 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 MCM7P33993 719 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 CCT6AP40227 531 aaKnown RBP28.92■■■□□ 2.22
COL13A1-203ENST00000398969 MECOMQ03112 1051 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 PFKFB3Q16875 520 aaPredicted RBP28.92■■■□□ 2.22
COL13A1-203ENST00000398969 LRRC10BA6NIK2 292 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 ADAMTS3O15072 1205 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 FBXO33Q7Z6M2 555 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 CELF1Q92879 486 aaKnown RBP28.92■■■□□ 2.22
COL13A1-203ENST00000398969 UBXN6Q9BZV1 441 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 EP400Q96L91 3159 aa28.92■■■□□ 2.22
COL13A1-203ENST00000398969 VEGFAP15692 232 aaPredicted RBP28.91■■■□□ 2.22
COL13A1-203ENST00000398969 LAMB1P07942 1786 aa28.91■■■□□ 2.22
COL13A1-203ENST00000398969 KLRK1P26718 216 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 PAK1Q13153 545 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 KRT27Q7Z3Y8 459 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 CRNKL1Q9BZJ0 848 aaKnown RBP28.9■■■□□ 2.22
COL13A1-203ENST00000398969 MYH13Q9UKX3 1938 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 N4BP3O15049 544 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 TXLNAP40222 546 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 SRGAP1Q7Z6B7 1085 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 CCDC24Q8N4L8 307 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 ARFGAP3Q9NP61 516 aa28.9■■■□□ 2.22
COL13A1-203ENST00000398969 SPAG1Q07617 926 aa28.89■■■□□ 2.22
COL13A1-203ENST00000398969 CYP2D6P10635 497 aa28.89■■■□□ 2.21
COL13A1-203ENST00000398969 COPB1P53618 953 aaKnown RBP28.89■■■□□ 2.21
COL13A1-203ENST00000398969 ZNF658Q5TYW1 1059 aaPredicted RBP28.89■■■□□ 2.21
COL13A1-203ENST00000398969 TAF3Q5VWG9 929 aa28.89■■■□□ 2.21
COL13A1-203ENST00000398969 CHMP4BP1P59074 171 aa28.88■■■□□ 2.21
COL13A1-203ENST00000398969 ZNF569Q5MCW4 686 aa28.88■■■□□ 2.21
COL13A1-203ENST00000398969 TMTC1Q8IUR5 882 aa28.88■■■□□ 2.21
COL13A1-203ENST00000398969 NELFBQ8WX92 580 aa28.88■■■□□ 2.21
COL13A1-203ENST00000398969 VPS16Q9H269 839 aa28.88■■■□□ 2.21
COL13A1-203ENST00000398969 ATP8A2Q9NTI2 1148 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms