RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 NBPF10Q6P3W6 841 aaKnown RBP16.8■□□□□ 0.28
CYLD-202ENST00000398568 ELOA2Q8IYF1 753 aaPredicted RBP16.8■□□□□ 0.28
CYLD-202ENST00000398568 POLR2DO15514 142 aaKnown RBP16.8■□□□□ 0.28
CYLD-202ENST00000398568 NDUFA10O95299 355 aa16.8■□□□□ 0.28
CYLD-202ENST00000398568 IPO7O95373 1038 aaKnown RBP16.8■□□□□ 0.28
CYLD-202ENST00000398568 EMBQ6PCB8 327 aa16.8■□□□□ 0.28
CYLD-202ENST00000398568 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
CYLD-202ENST00000398568 ALG1Q9BT22 464 aa16.8■□□□□ 0.28
CYLD-202ENST00000398568 MAP3K2Q9Y2U5 619 aa16.8■□□□□ 0.28
CYLD-202ENST00000398568 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
CYLD-202ENST00000398568 KRT86O43790 486 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 BUB1BO60566 1050 aaPredicted RBP16.79■□□□□ 0.28
CYLD-202ENST00000398568 TRIM14Q14142 442 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 TLDC1Q6P9B6 456 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 HOOK2Q96ED9 719 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 DSCC1Q9BVC3 393 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
CYLD-202ENST00000398568 CHGBP05060 677 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 NR1D1P20393 614 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 CCT6AP40227 531 aaKnown RBP16.79■□□□□ 0.28
CYLD-202ENST00000398568 SEC24CP53992 1094 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 PTPAQ15257 358 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 MARCH10Q8NA82 808 aaPredicted RBP16.79■□□□□ 0.28
CYLD-202ENST00000398568 PES1O00541 588 aaKnown RBP16.79■□□□□ 0.28
CYLD-202ENST00000398568 KCNQ2O43526 872 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 FAM107AO95990 144 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 FECHP22830 423 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 PBX1P40424 430 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 MDM2Q00987 491 aaPredicted RBP16.79■□□□□ 0.28
CYLD-202ENST00000398568 NBPF9Q3BBW0 867 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 ITIH6Q6UXX5 1313 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
CYLD-202ENST00000398568 NOC3LQ8WTT2 800 aaKnown RBP16.79■□□□□ 0.28
CYLD-202ENST00000398568 APBA1Q02410 837 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 POLD4Q9HCU8 107 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 LMO7Q8WWI1 1683 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 ATP2C2O75185 946 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 IDEP14735 1019 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 INHBEP58166 350 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 RUBCNQ92622 972 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 SUCLG2Q96I99 432 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
CYLD-202ENST00000398568 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
CYLD-202ENST00000398568 KRT83P78385 493 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 CWF19L2Q2TBE0 894 aaKnown RBP16.78■□□□□ 0.28
CYLD-202ENST00000398568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.78■□□□□ 0.28
CYLD-202ENST00000398568 CCDC26Q8TAB7 109 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 TBC1D31Q96DN5 1066 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 BAIAP2L1Q9UHR4 511 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 SH3BP1Q9Y3L3 701 aa16.78■□□□□ 0.28
CYLD-202ENST00000398568 ANKRD33BA6NCL7 494 aa16.77■□□□□ 0.28
CYLD-202ENST00000398568 A1BGP04217 495 aa16.77■□□□□ 0.28
CYLD-202ENST00000398568 MAB21L3Q8N8X9 362 aa16.77■□□□□ 0.28
CYLD-202ENST00000398568 ZIM3Q96PE6 472 aa16.77■□□□□ 0.28
CYLD-202ENST00000398568 PPANQ9NQ55 473 aaKnown RBP16.77■□□□□ 0.28
CYLD-202ENST00000398568 RFX7Q2KHR2 1363 aa16.77■□□□□ 0.28
CYLD-202ENST00000398568 EME2A4GXA9 379 aaPredicted RBP16.77■□□□□ 0.27
CYLD-202ENST00000398568 ZNF185O15231 689 aa16.77■□□□□ 0.27
CYLD-202ENST00000398568 SNUPNO95149 360 aaKnown RBP16.77■□□□□ 0.27
CYLD-202ENST00000398568 MDH1P40925 334 aaKnown RBP16.77■□□□□ 0.27
CYLD-202ENST00000398568 FAM228AQ86W67 206 aa16.77■□□□□ 0.27
CYLD-202ENST00000398568 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.27
CYLD-202ENST00000398568 LMBR1Q8WVP7 490 aa16.77■□□□□ 0.27
CYLD-202ENST00000398568 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.77■□□□□ 0.27
CYLD-202ENST00000398568 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.27
CYLD-202ENST00000398568 GRM8O00222 908 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 KCNQ4P56696 695 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 KRT40Q6A162 431 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 ARFGAP2Q8N6H7 521 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 TSEN2Q8NCE0 465 aaKnown RBP16.76■□□□□ 0.27
CYLD-202ENST00000398568 TATDN2Q93075 761 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 SEMA3EO15041 775 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 SARSP49591 514 aaKnown RBP16.76■□□□□ 0.27
CYLD-202ENST00000398568 VAV2P52735 878 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 TRAF1Q13077 416 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 NT5DC1Q5TFE4 455 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 MMGT1Q8N4V1 131 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 KLHDC4Q8TBB5 520 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 MICAL1Q8TDZ2 1067 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 MED15Q96RN5 788 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 KRT14P02533 472 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 CCDC181Q5TID7 509 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 APTXQ7Z2E3 356 aaKnown RBP16.76■□□□□ 0.27
CYLD-202ENST00000398568 KRT27Q7Z3Y8 459 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 RASSF8Q8NHQ8 419 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 CHP1Q99653 195 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 LRRC1Q9BTT6 524 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 VPS16Q9H269 839 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 HELLSQ9NRZ9 838 aa16.76■□□□□ 0.27
CYLD-202ENST00000398568 GOLGA6L10A6NI86 522 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 ENO4A6NNW6 628 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 CDC25AP30304 524 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 CAPRIN2Q6IMN6 1127 aaKnown RBP16.75■□□□□ 0.27
CYLD-202ENST00000398568 NBPF5PQ86XG9 351 aaPredicted RBP16.75■□□□□ 0.27
CYLD-202ENST00000398568 ZBTB10Q96DT7 871 aa16.75■□□□□ 0.27
CYLD-202ENST00000398568 CYFIP2Q96F07 1278 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms