RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 MAGEB6P1A0A0J9YX57 407 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 RCCD1A6NED2 376 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 POLR3DP05423 398 aaPredicted RBP11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 SHMT1P34896 483 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 ABCB5Q2M3G0 1257 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 DDX60LQ5H9U9 1706 aaKnown RBP11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 NECAB2Q7Z6G3 386 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 CERS3Q8IU89 383 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 ACER1Q8TDN7 264 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 RIOK1Q9BRS2 568 aaKnown RBP11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 PRO3102Q9H379 93 aa11.9□□□□□ -0.5
NIFKP1-201ENST00000398317 MYH8P13535 1937 aa11.9□□□□□ -0.51
NIFKP1-201ENST00000398317 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 CNMDO75829 334 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 PDE6AP16499 860 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 CAPN2P17655 700 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 MAPK4P31152 587 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 PDE3AQ14432 1141 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 CCL14Q16627 93 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 SLC9C2Q5TAH2 1124 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 GPR142Q7Z601 462 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 PLEKHH3Q7Z736 793 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 SIRT2Q8IXJ6 389 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 SOCS4Q8WXH5 440 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 EDC3Q96F86 508 aaKnown RBP11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 DNAJC2Q99543 621 aaKnown RBP11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 EHD4Q9H223 541 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
NIFKP1-201ENST00000398317 ZNF532Q9HCE3 1301 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 GOLIM4O00461 696 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 XRCC5P13010 732 aaKnown RBP11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 ZKSCAN1P17029 563 aaPredicted RBP11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 GUCY1A2P33402 732 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 CACNB2Q08289 660 aaPredicted RBP11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 TTF1Q15361 905 aaPredicted RBP11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 SLFNL1Q499Z3 407 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 MORN1Q5T089 497 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 MAP3K21Q5TCX8 1036 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 CATSPERGQ6ZRH7 1159 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 METTL3Q86U44 580 aaKnown RBP11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 C7orf61Q8IZ16 206 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 ANKLE1Q8NAG6 615 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 SDR42E1Q8WUS8 393 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 USP6NLQ92738 828 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 C12orf42Q96LP6 360 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 CABP5Q9NP86 173 aa11.88□□□□□ -0.51
NIFKP1-201ENST00000398317 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 CYP2D6P10635 497 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 VCAM1P19320 739 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 DNAJB2P25686 324 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 CCND3P30281 292 aaPredicted RBP11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 RGS2P41220 211 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 USP14P54578 494 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 GABPAQ06546 454 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 SEPT2Q15019 361 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 WDR78Q5VTH9 848 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 TMED8Q6PL24 325 aaPredicted RBP11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 RPAP2Q8IXW5 612 aaPredicted RBP11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 LCORLQ8N3X6 602 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 CRNKL1Q9BZJ0 848 aaKnown RBP11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 RPAP3Q9H6T3 665 aaPredicted RBP11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 MCM9Q9NXL9 1143 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 TSR3Q9UJK0 312 aaKnown RBP11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 RABGAP1Q9Y3P9 1069 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 MYH7P12883 1935 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 COL6A3P12111 3177 aa11.87□□□□□ -0.51
NIFKP1-201ENST00000398317 TCRBV5S4A2TA0A5A2 114 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 MPHOSPH10O00566 681 aaKnown RBP11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 HMMRO75330 724 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 MS4A1P11836 297 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 TRMT44Q8IYL2 757 aaKnown RBP11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 SLC44A5Q8NCS7 719 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 C11orf49Q9H6J7 331 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 ARMT1Q9H993 441 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 ZBTB40Q9NUA8 1239 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 BTBD7Q9P203 1132 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms