RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 MINDY4BA8MYZ0 360 aa18.02■□□□□ 0.48
CHMP1A-201ENST00000397901 SMIM22K7EJ46 135 aa18.02■□□□□ 0.48
CHMP1A-201ENST00000397901 KIF5CO60282 957 aa18.02■□□□□ 0.48
CHMP1A-201ENST00000397901 ZNF569Q5MCW4 686 aa18.02■□□□□ 0.48
CHMP1A-201ENST00000397901 INTS5Q6P9B9 1019 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-201ENST00000397901 SYMPKQ92797 1274 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-201ENST00000397901 RREB1Q92766 1687 aa18.02■□□□□ 0.48
CHMP1A-201ENST00000397901 WNT7AO00755 349 aa18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 TFRCP02786 760 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 CASP14P31944 242 aa18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 AKAP17AQ02040 695 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 CUL4BQ13620 913 aa18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 MARCH10Q8NA82 808 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 ADD3Q9UEY8 706 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 MROH5Q6ZUA9 1318 aa18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 CCT6AP40227 531 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 MNAT1P51948 309 aa18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 CASP8Q14790 479 aa18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 FAM204AQ9H8W3 233 aa18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 AATFQ9NY61 560 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 LRP5O75197 1615 aa18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 CICQ96RK0 1608 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-201ENST00000397901 MFAP3LO75121 409 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 BCAMP50895 628 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 SPATA31A5Q5VU36 1347 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 SPATA31A7Q8IWB4 1347 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 KIF4BQ2VIQ3 1234 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 ACRBPQ8NEB7 543 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 PNKPQ96T60 521 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 IQSEC3Q9UPP2 1182 aaPredicted RBP18■□□□□ 0.47
CHMP1A-201ENST00000397901 CTNND2Q9UQB3 1225 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 TNKSO95271 1327 aa18■□□□□ 0.47
CHMP1A-201ENST00000397901 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 TUBBP07437 444 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 PBX1P40424 430 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 FXR1P51114 621 aaKnown RBP eCLIP17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 SATB1Q01826 763 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 PPARAQ07869 468 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 TUBB2AQ13885 445 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 ZNF174Q15697 407 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 CDKAL1Q5VV42 579 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 TMTC2Q8N394 836 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 ACSBG1Q96GR2 724 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 TUBB2BQ9BVA1 445 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 PLEKHA4Q9H4M7 779 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 LRP2BPQ9P2M1 347 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 CDC23Q9UJX2 597 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 ABL1P00519 1130 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 GYPCP04921 128 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 KRT2P35908 639 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 DPYDQ12882 1025 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 FILIP1LQ4L180 1135 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 CDC5LQ99459 802 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 NAA15Q9BXJ9 866 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-201ENST00000397901 PPP1R3GB7ZBB8 358 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 GNAT2P19087 354 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 HNRNPH1P31943 449 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 CRKLP46109 303 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 SH3RF1Q7Z6J0 888 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 SLC35F6Q8N357 371 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 BLZF1Q9H2G9 400 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 RNF41Q9H4P4 317 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 BCCIPQ9P287 314 aaKnown RBP eCLIP17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 MYH14Q7Z406 1995 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 PHACTR2O75167 634 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 CDC25AP30304 524 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 PKN1Q16512 942 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 KAT2BQ92831 832 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 SUGCTQ9HAC7 445 aa17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 V9GY48 417 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-201ENST00000397901 PNPLA7Q6ZV29 1317 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 LOC102724428A0A0B4J2F2 783 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 XBP1P17861 261 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 SIK1P57059 783 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 RASGRP2Q7LDG7 609 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 CTAGE1Q96RT6 745 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 TACO1Q9BSH4 297 aaKnown RBP17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 RHOXF2BP0C7M4 288 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 ITPK1Q13572 414 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 SUSD4Q5VX71 490 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 RHOXF2Q9BQY4 288 aa17.97■□□□□ 0.47
CHMP1A-201ENST00000397901 CTAGE9A4FU28 777 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 CYP7A1P22680 504 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 SEC23AQ15436 765 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 CNGA4Q8IV77 575 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 PHF20Q9BVI0 1012 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 VPS16Q9H269 839 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 KCNG1Q9UIX4 513 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 ARAP2Q8WZ64 1704 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 CYP2D7A0A087X1C5 515 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 N4BP3O15049 544 aa17.96■□□□□ 0.47
CHMP1A-201ENST00000397901 RNF40O75150 1001 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms