RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 PARP1P09874 1014 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 BMP3P12645 472 aa22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 DEFB115Q30KQ5 88 aa22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 ASPRV1Q53RT3 343 aa22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 FANCBQ8NB91 859 aa22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 CHMP4CQ96CF2 233 aa22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 NUP88Q99567 741 aaPredicted RBP22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 SH2B1Q9NRF2 756 aaPredicted RBP22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 MAD2L2Q9UI95 211 aa22.71■■□□□ 1.23
MAP1LC3A-203ENST00000397709 CETPP11597 493 aa22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 C1QTNF8P60827 252 aa22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 STK3Q13188 491 aa22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 RTN1Q16799 776 aa22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CCDC96Q2M329 555 aa22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 FAM83BQ5T0W9 1011 aa22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CYP4F22Q6NT55 531 aa22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 FASTKD5Q7L8L6 764 aaKnown RBP22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CCDC144CPQ8IYA2 1237 aa22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CTCFLQ8NI51 663 aaPredicted RBP22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 SLKQ9H2G2 1235 aaPredicted RBP22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 FAM217BQ9NTX9 383 aaPredicted RBP22.7■■□□□ 1.22
MAP1LC3A-203ENST00000397709 FRMPD2Q68DX3 1309 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 TESPA1A2RU30 521 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 KIF5BP33176 963 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 SCRN1Q12765 414 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 PPP2R5BQ15173 497 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 TREML2Q5T2D2 321 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 GPATCH4Q5T3I0 446 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 GADL1Q6ZQY3 521 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 PAXIP1Q6ZW49 1069 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 KCTD1Q719H9 257 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 STAG2Q8N3U4 1231 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 BRI3BPQ8WY22 251 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 GTF3C6Q969F1 213 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 TMX3Q96JJ7 454 aa22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 RPAP3Q9H6T3 665 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 RBM28Q9NW13 759 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CCL15-CCL14A0A0B4J2E2 113 aa22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 MANSC4A6NHS7 340 aaPredicted RBP22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 GOLGA8HP0CJ92 632 aa22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CDC27P30260 824 aa22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CCT2P78371 535 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 ST3GAL1Q11201 340 aa22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CCL15Q16663 113 aa22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 GPAT2Q6NUI2 795 aa22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 HSCBQ8IWL3 235 aa22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 NCOA5Q9HCD5 579 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 AGTPBP1Q9UPW5 1226 aa22.68■■□□□ 1.22
MAP1LC3A-203ENST00000397709 PARP14Q460N5 1801 aa22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 K7ELQ4 463 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 PLA2G6O60733 806 aa22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 GNAQP50148 359 aa22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 HTRA3P83110 453 aa22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 TMTC3Q6ZXV5 915 aa22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 NECAB1Q8N987 351 aa22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CAPNS2Q96L46 248 aa22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 GPCPD1Q9NPB8 672 aa22.67■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CCDC196A0A1B0GTZ2 297 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L15C9J2P7 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L13C9JLJ4 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 TMEM232C9JQI7 657 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L11C9JVI0 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L18D6R9N7 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L22D6RA61 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L17D6RBQ6 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L19D6RCP7 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L20D6RJB6 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 PLEKHA8P1O95397 391 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 HSPA6P17066 643 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 HOXA7P31268 230 aaPredicted RBP22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 ADD1P35611 737 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 USP17L24Q0WX57 530 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 TTBK2Q6IQ55 1244 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 BTNL9Q6UXG8 535 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 CATSPERGQ6ZRH7 1159 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 LZTS2Q9BRK4 669 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 FEM1BQ9UK73 627 aa22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 RBM19Q9Y4C8 960 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3A-203ENST00000397709 RLFQ13129 1914 aa22.65■■□□□ 1.22
MAP1LC3A-203ENST00000397709 KLRF2D3W0D1 207 aa22.65■■□□□ 1.22
MAP1LC3A-203ENST00000397709 NOGQ13253 232 aa22.65■■□□□ 1.22
MAP1LC3A-203ENST00000397709 NTRK3Q16288 839 aa22.65■■□□□ 1.22
MAP1LC3A-203ENST00000397709 SLC35G1Q2M3R5 365 aa22.65■■□□□ 1.22
MAP1LC3A-203ENST00000397709 ANKRD23Q86SG2 305 aa22.65■■□□□ 1.22
MAP1LC3A-203ENST00000397709 TANGO6Q9C0B7 1094 aa22.65■■□□□ 1.22
MAP1LC3A-203ENST00000397709 ISY1Q9ULR0 285 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3A-203ENST00000397709 BTBD19C9JJ37 291 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SMARCA1P28370 1054 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 STAT2P52630 851 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 FUT2Q10981 343 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 GRM1Q13255 1194 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 PABPC4Q13310 644 aaKnown RBP eCLIP22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 NBPF11Q86T75 865 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 FAM160B2Q86V87 743 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CCDC83Q8IWF9 413 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 SRBD1Q8N5C6 995 aaKnown RBP22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 ZIC5Q96T25 663 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 PTPN18Q99952 460 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 CPVLQ9H3G5 476 aa22.64■■□□□ 1.21
MAP1LC3A-203ENST00000397709 FBXO28Q9NVF7 368 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms