RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TCHPQ9BT92 498 aa12□□□□□ -0.49
CCDC40-204ENST00000397545 RTEL1Q9NZ71 1219 aa12□□□□□ -0.49
CCDC40-204ENST00000397545 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
CCDC40-204ENST00000397545 CHMP2AO43633 222 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 ZMYND10O75800 440 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 VIMP08670 466 aaKnown RBP11.99□□□□□ -0.49
CCDC40-204ENST00000397545 GSTA5Q7RTV2 222 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 CCDC65Q8IXS2 484 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 CDC25AP30304 524 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 GYG1P46976 350 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 FOXO4P98177 505 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 ZNF804AQ7Z570 1209 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 CCDC50Q8IVM0 306 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 MAPKAPK5Q8IW41 473 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 FERMT2Q96AC1 680 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 EHMT1Q9H9B1 1298 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 RASAL2Q9UJF2 1139 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 INPP5BP32019 993 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 SLC39A14Q15043 492 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 CNNM4Q6P4Q7 775 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 MAEAQ7L5Y9 396 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 MRRFQ96E11 262 aaKnown RBP11.99□□□□□ -0.49
CCDC40-204ENST00000397545 IFIH1Q9BYX4 1025 aaKnown RBP11.99□□□□□ -0.49
CCDC40-204ENST00000397545 PDE11AQ9HCR9 933 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 IKBKGQ9Y6K9 419 aa11.99□□□□□ -0.49
CCDC40-204ENST00000397545 MAST3O60307 1309 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 TNKSO95271 1327 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 H7C1W4 665 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 GUCY2FP51841 1108 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 NR5A1Q13285 461 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 LINC00301Q8NCQ3 95 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 CARD10Q9BWT7 1032 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 DDX41Q9UJV9 622 aaKnown RBP11.98□□□□□ -0.49
CCDC40-204ENST00000397545 EFCAB8A8MWE9 144 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 KCNJ18B7U540 433 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 CASP14P31944 242 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 ZBTB16Q05516 673 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 PPARAQ07869 468 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 KCNJ12Q14500 433 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 CCDC6Q16204 474 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 SLC9C1Q4G0N8 1177 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 ANKS4BQ8N8V4 417 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 OSBP2Q969R2 916 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 NOX5Q96PH1 765 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 ACTN2P35609 894 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 ATP1A2P50993 1020 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 MRPL12P52815 198 aaKnown RBP11.98□□□□□ -0.49
CCDC40-204ENST00000397545 PTGDRQ13258 359 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
CCDC40-204ENST00000397545 ZMYM1Q5SVZ6 1142 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 APOA5Q6Q788 366 aa11.98□□□□□ -0.49
CCDC40-204ENST00000397545 CETN3O15182 167 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 TRIM37O94972 964 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 NONOQ15233 471 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC40-204ENST00000397545 PPP1R7Q15435 360 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 INF2Q27J81 1249 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 CABP7Q86V35 215 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 PIGBQ92521 554 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 GPKOWQ92917 476 aaPredicted RBP eCLIP11.97□□□□□ -0.49
CCDC40-204ENST00000397545 TSGA10Q9BZW7 698 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 CCNL1Q9UK58 526 aaPredicted RBP11.97□□□□□ -0.49
CCDC40-204ENST00000397545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC40-204ENST00000397545 CARMIL3Q8ND23 1372 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 A0A1W2PQ27 194 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 A0A1W2PQ64 194 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 A0A1W2PQD8 194 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 RESTQ13127 1097 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 SLC35F6Q8N357 371 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 GREM2Q9H772 168 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
CCDC40-204ENST00000397545 GOLGA8HP0CJ92 632 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 KLHL30Q0D2K2 578 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 MORC3Q14149 939 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 DPH6Q7L8W6 267 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 ATG9AQ7Z3C6 839 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 PPP1R14CQ8TAE6 165 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 FAM212AQ96EL1 285 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 CCDC77Q9BR77 488 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 NSRP1Q9H0G5 558 aaKnown RBP11.97□□□□□ -0.49
CCDC40-204ENST00000397545 CALCOCO2Q13137 446 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 TTC19Q6DKK2 380 aaPredicted RBP11.97□□□□□ -0.49
CCDC40-204ENST00000397545 PGBD1Q96JS3 809 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 SYNCQ9H7C4 482 aa11.97□□□□□ -0.49
CCDC40-204ENST00000397545 SAMSN1Q9NSI8 373 aaKnown RBP11.97□□□□□ -0.49
CCDC40-204ENST00000397545 A0A0G2JLW4 131 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 ST3GAL1Q11201 340 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 BRD3Q15059 726 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 FBXO38Q6PIJ6 1188 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 DAAM2Q86T65 1068 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 SYMPKQ92797 1274 aaKnown RBP11.96□□□□□ -0.49
CCDC40-204ENST00000397545 PDLIM2Q96JY6 352 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 CSRNP2Q9H175 543 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 USP54Q70EL1 1684 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 ZMYM6O95789 1325 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 BUB1O43683 1085 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 SPOPO43791 374 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 RPL13P26373 211 aaKnown RBP11.96□□□□□ -0.49
CCDC40-204ENST00000397545 ST5P78524 1137 aa11.96□□□□□ -0.49
CCDC40-204ENST00000397545 DMTNQ08495 405 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms