RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 REC8O95072 547 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 DSG3P32926 999 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 ARHGEF6Q15052 776 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 GPRC5AQ8NFJ5 357 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 ATG4CQ96DT6 458 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 GMCL1Q96IK5 515 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 HOXC10Q9NYD6 342 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 RABGAP1Q9Y3P9 1069 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 A0A0G2JMZ2 1700 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 MYPNQ86TC9 1320 aa24.93■■□□□ 1.58
TSPAN4-206ENST00000397408 FMNL1O95466 1100 aaPredicted RBP24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 MCCP23508 829 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 SLC1A4P43007 532 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 FCGRTP55899 365 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 ERVK-9P63128 1117 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 ERVK-24P63145 666 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 RNF20Q5VTR2 975 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 RASGRP2Q7LDG7 609 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 DGKHQ86XP1 1220 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 TNS4Q8IZW8 715 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 ENAHQ8N8S7 591 aaPredicted RBP24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 TRIM47Q96LD4 638 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 MCOLN1Q9GZU1 580 aa24.92■■□□□ 1.58
TSPAN4-206ENST00000397408 CNMDO75829 334 aa24.91■■□□□ 1.58
TSPAN4-206ENST00000397408 BMP3P12645 472 aa24.91■■□□□ 1.58
TSPAN4-206ENST00000397408 PPP1R9AQ9ULJ8 1098 aa24.91■■□□□ 1.58
TSPAN4-206ENST00000397408 MGAMO43451 1857 aa24.91■■□□□ 1.58
TSPAN4-206ENST00000397408 MB21D2Q8IYB1 491 aaPredicted RBP24.9■■□□□ 1.58
TSPAN4-206ENST00000397408 SLF1Q9BQI6 1058 aa24.9■■□□□ 1.58
TSPAN4-206ENST00000397408 BTBD7Q9P203 1132 aa24.9■■□□□ 1.58
TSPAN4-206ENST00000397408 PKN2Q16513 984 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-206ENST00000397408 CCDC96Q2M329 555 aa24.89■■□□□ 1.58
TSPAN4-206ENST00000397408 Q3C1V9 767 aa24.89■■□□□ 1.58
TSPAN4-206ENST00000397408 TNPO2O14787 897 aaKnown RBP24.88■■□□□ 1.57
TSPAN4-206ENST00000397408 CHST3Q7LGC8 479 aa24.88■■□□□ 1.57
TSPAN4-206ENST00000397408 MB21D1Q8N884 522 aa24.88■■□□□ 1.57
TSPAN4-206ENST00000397408 DCAF4Q8WV16 495 aa24.88■■□□□ 1.57
TSPAN4-206ENST00000397408 ANKS1AQ92625 1134 aa24.88■■□□□ 1.57
TSPAN4-206ENST00000397408 KAT14Q9H8E8 782 aa24.88■■□□□ 1.57
TSPAN4-206ENST00000397408 FEM1BQ9UK73 627 aa24.88■■□□□ 1.57
TSPAN4-206ENST00000397408 TMEM232C9JQI7 657 aa24.87■■□□□ 1.57
TSPAN4-206ENST00000397408 GNRH1P01148 92 aa24.87■■□□□ 1.57
TSPAN4-206ENST00000397408 IFIT1BQ5T764 474 aaKnown RBP24.87■■□□□ 1.57
TSPAN4-206ENST00000397408 KCTD1Q719H9 257 aa24.87■■□□□ 1.57
TSPAN4-206ENST00000397408 PNMA1Q8ND90 353 aa24.87■■□□□ 1.57
TSPAN4-206ENST00000397408 IFIT3O14879 490 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 PDHBP11177 359 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 ZKSCAN1P17029 563 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 STAT2P52630 851 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 ANTXR2P58335 489 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 CCNA1P78396 465 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 IKQ13123 557 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 SEC23AQ15436 765 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 FBXO46Q6PJ61 603 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 RASEFQ8IZ41 740 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 PRPF38AQ8NAV1 312 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 KIFC2Q96AC6 838 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 PORCNQ9H237 461 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 ADAMTS5Q9UNA0 930 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 FRMPD2Q68DX3 1309 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 ERICH2A1L162 156 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 VWA5AO00534 786 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 HOXD10P28358 340 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 SART3Q15020 963 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 CCAR1Q8IX12 1150 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 SRRDQ9UH36 339 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 PTPN22Q9Y2R2 807 aa24.86■■□□□ 1.57
TSPAN4-206ENST00000397408 COL11A1P12107 1806 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 HTTP42858 3142 aa24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 HSPA4P34932 840 aa24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 COL9A3Q14050 684 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 PLS1Q14651 629 aa24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 FAM160B2Q86V87 743 aa24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 COA7Q96BR5 231 aa24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 SPATC1LQ9H0A9 340 aa24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 GTF3C3Q9Y5Q9 886 aa24.85■■□□□ 1.57
TSPAN4-206ENST00000397408 DOCK3Q8IZD9 2030 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 PRC1O43663 620 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 MAPK4P31152 587 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 MCM5P33992 734 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 PRKCZQ05513 592 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 TMEM132BQ14DG7 1078 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 TSGA10IPQ3SY00 556 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 TMEM67Q5HYA8 995 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 CHURC1Q8WUH1 139 aa24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 MOV10L1Q9BXT6 1211 aaKnown RBP24.84■■□□□ 1.57
TSPAN4-206ENST00000397408 EPB41L2O43491 1005 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 SNHG28P0DPA3 235 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 PRMT2P55345 433 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 KRT32Q14532 448 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 WTAPQ15007 396 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 WDR78Q5VTH9 848 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 REPS2Q8NFH8 660 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 CWC22Q9HCG8 908 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 GPCPD1Q9NPB8 672 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 GABRQQ9UN88 632 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 PTCH2Q9Y6C5 1203 aa24.83■■□□□ 1.57
TSPAN4-206ENST00000397408 PLA2G6O60733 806 aa24.82■■□□□ 1.56
TSPAN4-206ENST00000397408 ZNF543Q08ER8 600 aa24.82■■□□□ 1.56
TSPAN4-206ENST00000397408 ADCK5Q3MIX3 580 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms