RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NYAP2Q9P242 653 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 MYH6P13533 1939 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 SPDYE5A6NIY4 337 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CTDNEP1O95476 244 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CDC27P30260 824 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 RGS19P49795 217 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CRHR2Q13324 411 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 SIAH1Q8IUQ4 282 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CCDC144CPQ8IYA2 1237 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 FANCBQ8NB91 859 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 NSUN7Q8NE18 718 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 OTUD5Q96G74 571 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CLIP2Q9UDT6 1046 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CTNND1O60716 968 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 EEF2P13639 858 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 ADD1P35611 737 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 ICA1Q05084 483 aa19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 RAB3GAP1Q15042 981 aa19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 NUP133Q8WUM0 1156 aa19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 MKL1Q969V6 931 aa19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 CHMP4CQ96CF2 233 aa19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 MAP3K14Q99558 947 aa19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 LLPHQ9BRT6 129 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-205ENST00000397406 HTTP42858 3142 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 DHX16O60231 1041 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 DTNBO60941 627 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 FKTNO75072 461 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 ALDH1A1P00352 501 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 ASNSP08243 561 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 PPP2R5BQ15173 497 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 RTN1Q16799 776 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 FAM43AQ8N2R8 423 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 SMARCC2Q8TAQ2 1214 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 CWC22Q9HCG8 908 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 GINM1Q9NU53 330 aa19.74■□□□□ 0.75
TSPAN4-205ENST00000397406 IRF6O14896 467 aa19.73■□□□□ 0.75
TSPAN4-205ENST00000397406 NTRK3Q16288 839 aa19.73■□□□□ 0.75
TSPAN4-205ENST00000397406 LRRC47Q8N1G4 583 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-205ENST00000397406 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-205ENST00000397406 SMC3Q9UQE7 1217 aa19.73■□□□□ 0.75
TSPAN4-205ENST00000397406 CSADQ9Y600 493 aa19.73■□□□□ 0.75
TSPAN4-205ENST00000397406 JAK2O60674 1132 aa19.72■□□□□ 0.75
TSPAN4-205ENST00000397406 GJB2P29033 226 aa19.72■□□□□ 0.75
TSPAN4-205ENST00000397406 GRM4Q14833 912 aa19.72■□□□□ 0.75
TSPAN4-205ENST00000397406 ERO1BQ86YB8 467 aa19.72■□□□□ 0.75
TSPAN4-205ENST00000397406 RBM28Q9NW13 759 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-205ENST00000397406 CCL15-CCL14A0A0B4J2E2 113 aa19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 CCDC196A0A1B0GTZ2 297 aa19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 PTPDC1A2A3K4 754 aa19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 ATP2B2Q01814 1243 aa19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 CCL15Q16663 113 aa19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 RASGRP2Q7LDG7 609 aa19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 SCYL3Q8IZE3 742 aa19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 CTCFLQ8NI51 663 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 SYNPO2Q9UMS6 1093 aa19.71■□□□□ 0.75
TSPAN4-205ENST00000397406 A0A1W2PRG0 241 aa19.7■□□□□ 0.74
TSPAN4-205ENST00000397406 CPLX1O14810 134 aa19.7■□□□□ 0.74
TSPAN4-205ENST00000397406 SNHG28P0DPA3 235 aa19.7■□□□□ 0.74
TSPAN4-205ENST00000397406 IFNAR1P17181 557 aa19.7■□□□□ 0.74
TSPAN4-205ENST00000397406 GTF2A2P52657 109 aa19.7■□□□□ 0.74
TSPAN4-205ENST00000397406 MOGSQ13724 837 aa19.7■□□□□ 0.74
TSPAN4-205ENST00000397406 NOL9Q5SY16 702 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-205ENST00000397406 MAD2L2Q9UI95 211 aa19.7■□□□□ 0.74
TSPAN4-205ENST00000397406 PALM3A6NDB9 673 aaPredicted RBP19.69■□□□□ 0.74
TSPAN4-205ENST00000397406 BTBD19C9JJ37 291 aa19.69■□□□□ 0.74
TSPAN4-205ENST00000397406 PDHBP11177 359 aa19.69■□□□□ 0.74
TSPAN4-205ENST00000397406 PPIL2Q13356 520 aa19.69■□□□□ 0.74
TSPAN4-205ENST00000397406 CPLX2Q6PUV4 134 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-205ENST00000397406 TMTC3Q6ZXV5 915 aa19.69■□□□□ 0.74
TSPAN4-205ENST00000397406 ARHGEF10LQ9HCE6 1279 aa19.69■□□□□ 0.74
TSPAN4-205ENST00000397406 USP17L5A8MUK1 530 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 CDKL5O76039 1030 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 PLEKHA8P1O95397 391 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 FDPSP14324 419 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 KIF5BP33176 963 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 HMGN5P82970 282 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 FUT2Q10981 343 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 OTOP1Q7RTM1 612 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 NBPF11Q86T75 865 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 CCDC84Q86UT8 332 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 STAG2Q8N3U4 1231 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 GMCL1P1Q8NEA9 526 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 ACER1Q8TDN7 264 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 CIZ1Q9ULV3 898 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 MTMR7Q9Y216 660 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 TMX2Q9Y320 296 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 BAZ2BQ9UIF8 2168 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 PPFIA3O75145 1194 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 SOX10P56693 466 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 USP17L2Q6R6M4 530 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 CMTR1Q8N1G2 835 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 CD99L2Q8TCZ2 262 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 DDX11Q96FC9 970 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 KCNH4Q9UQ05 1017 aa19.68■□□□□ 0.74
TSPAN4-205ENST00000397406 PTPRFP10586 1907 aa19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 STK36Q9NRP7 1315 aa19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 PARP1P09874 1014 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 PTPRAP18433 802 aa19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 GNAQP50148 359 aa19.67■□□□□ 0.74
TSPAN4-205ENST00000397406 PPATQ06203 517 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms