RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.37■■□□□ 1.97
TSPAN4-202ENST00000397396 TRPM7Q96QT4 1865 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 KLRF2D3W0D1 207 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 TOMM70O94826 608 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 CTDNEP1O95476 244 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 BMP3P12645 472 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 GJB2P29033 226 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 BACE1P56817 501 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 USP17L2Q6R6M4 530 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 SPZ1Q9BXG8 430 aa27.36■■□□□ 1.97
TSPAN4-202ENST00000397396 FMNL1O95466 1100 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-202ENST00000397396 SPP2Q13103 211 aa27.35■■□□□ 1.97
TSPAN4-202ENST00000397396 CCDC84Q86UT8 332 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-202ENST00000397396 ELP3Q9H9T3 547 aa27.35■■□□□ 1.97
TSPAN4-202ENST00000397396 ISY1Q9ULR0 285 aaKnown RBP27.35■■□□□ 1.97
TSPAN4-202ENST00000397396 AFG3L2Q9Y4W6 797 aa27.35■■□□□ 1.97
TSPAN4-202ENST00000397396 UBE2Q2LH0YL09 131 aa27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 WDR46O15213 610 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 PLEKHA8P1O95397 391 aa27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 PPIL2Q13356 520 aa27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 MTMR2Q13614 643 aa27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 MOB2Q70IA6 237 aa27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 C12orf42Q96LP6 360 aa27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 TMOD4Q9NZQ9 345 aa27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 ORC3Q9UBD5 711 aaPredicted RBP27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 CIZ1Q9ULV3 898 aaPredicted RBP27.34■■□□□ 1.97
TSPAN4-202ENST00000397396 TRIM75PA6NK02 468 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 CXCL11O14625 94 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 JAK2O60674 1132 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 DEXIO95424 95 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 FSTL1Q12841 308 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 ZYXQ15942 572 aaKnown RBP27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 STAG2Q8N3U4 1231 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 SLC10A4Q96EP9 437 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 SLC26A6Q9BXS9 759 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 PHIPQ8WWQ0 1821 aa27.33■■□□□ 1.97
TSPAN4-202ENST00000397396 FRMPD2Q68DX3 1309 aaPredicted RBP27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 CNTNAP5Q8WYK1 1306 aa27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 PASKQ96RG2 1323 aa27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 PRPF3O43395 683 aaKnown RBP27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 FMR1Q06787 632 aaKnown RBP eCLIP27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 SH3D19Q5HYK7 790 aa27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 SRBD1Q8N5C6 995 aaKnown RBP27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 RGS22Q8NE09 1264 aa27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 CLMNQ96JQ2 1002 aa27.32■■□□□ 1.96
TSPAN4-202ENST00000397396 PLA2G6O60733 806 aa27.31■■□□□ 1.96
TSPAN4-202ENST00000397396 GOLGA8HP0CJ92 632 aa27.31■■□□□ 1.96
TSPAN4-202ENST00000397396 FUT2Q10981 343 aa27.31■■□□□ 1.96
TSPAN4-202ENST00000397396 NBPF11Q86T75 865 aa27.31■■□□□ 1.96
TSPAN4-202ENST00000397396 FAM160B2Q86V87 743 aa27.31■■□□□ 1.96
TSPAN4-202ENST00000397396 DDX11Q96FC9 970 aa27.31■■□□□ 1.96
TSPAN4-202ENST00000397396 OTUD5Q96G74 571 aa27.31■■□□□ 1.96
TSPAN4-202ENST00000397396 GPCPD1Q9NPB8 672 aa27.31■■□□□ 1.96
TSPAN4-202ENST00000397396 STAT2P52630 851 aa27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 IKQ13123 557 aaPredicted RBP27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 KCTD1Q719H9 257 aa27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 SPICE1Q8N0Z3 855 aa27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 CHURC1Q8WUH1 139 aa27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 PHKBQ93100 1093 aa27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 OPTNQ96CV9 577 aa27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 FEM1BQ9UK73 627 aa27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 KCNH4Q9UQ05 1017 aa27.3■■□□□ 1.96
TSPAN4-202ENST00000397396 XBP1P17861 261 aa27.29■■□□□ 1.96
TSPAN4-202ENST00000397396 CST9Q5W186 159 aa27.29■■□□□ 1.96
TSPAN4-202ENST00000397396 BTNL9Q6UXG8 535 aa27.29■■□□□ 1.96
TSPAN4-202ENST00000397396 CCDC82Q8N4S0 544 aa27.29■■□□□ 1.96
TSPAN4-202ENST00000397396 ZNF784Q8NCA9 323 aaPredicted RBP27.29■■□□□ 1.96
TSPAN4-202ENST00000397396 RRP36Q96EU6 259 aaKnown RBP27.29■■□□□ 1.96
TSPAN4-202ENST00000397396 RIOX1Q9H6W3 641 aa27.29■■□□□ 1.96
TSPAN4-202ENST00000397396 SEC63Q9UGP8 760 aaKnown RBP27.29■■□□□ 1.96
TSPAN4-202ENST00000397396 FAM83BQ5T0W9 1011 aa27.28■■□□□ 1.96
TSPAN4-202ENST00000397396 RASGRP2Q7LDG7 609 aa27.28■■□□□ 1.96
TSPAN4-202ENST00000397396 EMILIN3Q9NT22 766 aa27.28■■□□□ 1.96
TSPAN4-202ENST00000397396 TMEM232C9JQI7 657 aa27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 hCG_1984214I3L0E3 225 aa27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 VCAM1P19320 739 aa27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 DDIT3P35638 169 aa27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 HMGCS2P54868 508 aa27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 NUCB2P80303 420 aa27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 LARP1BQ659C4 914 aaKnown RBP27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 FAM177A1Q8N128 213 aaPredicted RBP27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 CMTR1Q8N1G2 835 aaKnown RBP27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 ZNF713Q8N859 430 aaPredicted RBP27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 PROCA1Q8NCQ7 364 aaPredicted RBP27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 CHMP5Q9NZZ3 219 aa27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 V9GY48 417 aaPredicted RBP27.27■■□□□ 1.96
TSPAN4-202ENST00000397396 FDPSP14324 419 aaKnown RBP27.26■■□□□ 1.95
TSPAN4-202ENST00000397396 HUNKP57058 714 aa27.26■■□□□ 1.95
TSPAN4-202ENST00000397396 TRIM29Q14134 588 aa27.26■■□□□ 1.95
TSPAN4-202ENST00000397396 SYDE2Q5VT97 1194 aa27.26■■□□□ 1.95
TSPAN4-202ENST00000397396 NUP88Q99567 741 aaPredicted RBP27.26■■□□□ 1.95
TSPAN4-202ENST00000397396 ALG1Q9BT22 464 aa27.26■■□□□ 1.95
TSPAN4-202ENST00000397396 A0A0G2JLL6 359 aaPredicted RBP27.25■■□□□ 1.95
TSPAN4-202ENST00000397396 IRF6O14896 467 aa27.25■■□□□ 1.95
TSPAN4-202ENST00000397396 ZBTB48P10074 688 aaPredicted RBP27.25■■□□□ 1.95
TSPAN4-202ENST00000397396 SNAPC2Q13487 334 aa27.25■■□□□ 1.95
TSPAN4-202ENST00000397396 KIAA1755Q5JYT7 1200 aa27.25■■□□□ 1.95
TSPAN4-202ENST00000397396 FASTKD5Q7L8L6 764 aaKnown RBP27.25■■□□□ 1.95
TSPAN4-202ENST00000397396 PRRT2Q7Z6L0 340 aaPredicted RBP27.25■■□□□ 1.95
TSPAN4-202ENST00000397396 UBA5Q9GZZ9 404 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms