RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ADAMTS5Q9UNA0 930 aa16.54■□□□□ 0.24
SEC13-204ENST00000397099 ZNF236Q9UL36 1845 aa16.54■□□□□ 0.24
SEC13-204ENST00000397099 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 F5H6K3 240 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 FDX1P10109 184 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
SEC13-204ENST00000397099 PTPREP23469 700 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 TFAP4Q01664 338 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 KLRC3Q07444 240 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 MAP2K5Q13163 448 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 HABP4Q5JVS0 413 aaKnown RBP16.53■□□□□ 0.24
SEC13-204ENST00000397099 WDR78Q5VTH9 848 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 ABRAQ8N0Z2 381 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 FAM227BQ96M60 508 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 HMX1Q9NP08 348 aaPredicted RBP16.53■□□□□ 0.24
SEC13-204ENST00000397099 PAK6Q9NQU5 681 aaPredicted RBP16.53■□□□□ 0.24
SEC13-204ENST00000397099 BTBD7Q9P203 1132 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 CLIP2Q9UDT6 1046 aa16.53■□□□□ 0.24
SEC13-204ENST00000397099 TSPY2A6NKD2 308 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 FOXP2O15409 715 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 ORC4O43929 436 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 RAD21O60216 631 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 PRDM1O75626 825 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 FGAP02671 866 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 HOXC6P09630 235 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 FGRP09769 529 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 HSPD1P10809 573 aaKnown RBP16.52■□□□□ 0.24
SEC13-204ENST00000397099 TRIM32Q13049 653 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.24
SEC13-204ENST00000397099 GRB14Q14449 540 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 CCDC129Q6ZRS4 1044 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 CLEC10AQ8IUN9 316 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 PRPF38AQ8NAV1 312 aaKnown RBP16.52■□□□□ 0.24
SEC13-204ENST00000397099 RNF41Q9H4P4 317 aaPredicted RBP16.52■□□□□ 0.24
SEC13-204ENST00000397099 PPP1R9AQ9ULJ8 1098 aa16.52■□□□□ 0.24
SEC13-204ENST00000397099 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.52■□□□□ 0.24
SEC13-204ENST00000397099 KIAA1755Q5JYT7 1200 aa16.51■□□□□ 0.23
SEC13-204ENST00000397099 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
SEC13-204ENST00000397099 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
SEC13-204ENST00000397099 ANKLE1Q8NAG6 615 aa16.51■□□□□ 0.23
SEC13-204ENST00000397099 TRIB2Q92519 343 aa16.51■□□□□ 0.23
SEC13-204ENST00000397099 SLF1Q9BQI6 1058 aa16.51■□□□□ 0.23
SEC13-204ENST00000397099 MOV10L1Q9BXT6 1211 aaKnown RBP16.51■□□□□ 0.23
SEC13-204ENST00000397099 VWA5AO00534 786 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 NDUFB10O96000 172 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 FAM83BQ5T0W9 1011 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 MAP3K21Q5TCX8 1036 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 MFSD14CQ5VZR4 134 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 GMCL1Q96IK5 515 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 CRISPLD2Q9H0B8 497 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 CTNNA3Q9UI47 895 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 FEM1BQ9UK73 627 aa16.5■□□□□ 0.23
SEC13-204ENST00000397099 COLQQ9Y215 455 aaPredicted RBP16.5■□□□□ 0.23
SEC13-204ENST00000397099 COL11A1P12107 1806 aaPredicted RBP16.49■□□□□ 0.23
SEC13-204ENST00000397099 RANBP6O60518 1105 aaKnown RBP16.49■□□□□ 0.23
SEC13-204ENST00000397099 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
SEC13-204ENST00000397099 ERCC3P19447 782 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 PLS1Q14651 629 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
SEC13-204ENST00000397099 DPP9Q86TI2 863 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 RIOX2Q8IUF8 465 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 RUFY2Q8WXA3 655 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 DSCC1Q9BVC3 393 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 TCP11L1Q9NUJ3 509 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 STX8Q9UNK0 236 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 CTDP1Q9Y5B0 961 aaPredicted RBP16.49■□□□□ 0.23
SEC13-204ENST00000397099 NR2E3Q9Y5X4 410 aa16.49■□□□□ 0.23
SEC13-204ENST00000397099 RAD50Q92878 1312 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 LAMA4Q16363 1823 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 ZNF213O14771 459 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 EVI5O60447 810 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 MSCO60682 206 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 PLA2G6O60733 806 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 ZBED4O75132 1171 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 FCER1AP12319 257 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 BMP3P12645 472 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 STAT3P40763 770 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 NOVP48745 357 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 OAZ1P54368 228 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 CTDSPL2Q05D32 466 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 TMEM132BQ14DG7 1078 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 TTC22Q5TAA0 569 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 OLFML2BQ68BL8 750 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
SEC13-204ENST00000397099 MFSD6Q6ZSS7 791 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 NECAB2Q7Z6G3 386 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 ZNF589Q86UQ0 364 aaPredicted RBP16.48■□□□□ 0.23
SEC13-204ENST00000397099 NCAPG2Q86XI2 1143 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 CHURC1Q8WUH1 139 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 PAWRQ96IZ0 340 aaKnown RBP16.48■□□□□ 0.23
SEC13-204ENST00000397099 TTC14Q96N46 770 aa16.48■□□□□ 0.23
SEC13-204ENST00000397099 TEX13BQ9BXU2 312 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms