RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 FASTKD5Q7L8L6 764 aaKnown RBP12.47□□□□□ -0.41
NUP98-205ENST00000397007 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
NUP98-205ENST00000397007 ZNF408Q9H9D4 720 aa12.47□□□□□ -0.41
NUP98-205ENST00000397007 MYH7BA7E2Y1 1941 aa12.47□□□□□ -0.41
NUP98-205ENST00000397007 TSPY2A6NKD2 308 aa12.47□□□□□ -0.41
NUP98-205ENST00000397007 DSG3P32926 999 aa12.47□□□□□ -0.41
NUP98-205ENST00000397007 ZNF214Q9UL59 606 aaPredicted RBP12.47□□□□□ -0.41
NUP98-205ENST00000397007 USP6NLQ92738 828 aa12.46□□□□□ -0.41
NUP98-205ENST00000397007 ARHGEF10LQ9HCE6 1279 aa12.46□□□□□ -0.41
NUP98-205ENST00000397007 CABP5Q9NP86 173 aa12.46□□□□□ -0.41
NUP98-205ENST00000397007 HMGCS2P54868 508 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.42
NUP98-205ENST00000397007 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.42
NUP98-205ENST00000397007 CTDNEP1O95476 244 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 ZKSCAN3Q9BRR0 538 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 SLC38A10Q9HBR0 1119 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 RNF186Q9NXI6 227 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 CLIP2Q9UDT6 1046 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.42
NUP98-205ENST00000397007 PPP1R11O60927 126 aaPredicted RBP12.45□□□□□ -0.42
NUP98-205ENST00000397007 ZKSCAN1P17029 563 aaPredicted RBP12.45□□□□□ -0.42
NUP98-205ENST00000397007 PSMA5P28066 241 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
NUP98-205ENST00000397007 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 PNMA1Q8ND90 353 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 RGS22Q8NE09 1264 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 SPZ1Q9BXG8 430 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 FRMPD4Q14CM0 1322 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 CENPFP49454 3210 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 OPLAHO14841 1288 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 LARGE1O95461 756 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 CASTP20810 708 aaKnown RBP12.45□□□□□ -0.42
NUP98-205ENST00000397007 OAZ1P54368 228 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 RAB3GAP1Q15042 981 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 Q6ZUG5 572 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 CHST3Q7LGC8 479 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 TMTC2Q8N394 836 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 ASCC2Q9H1I8 757 aaPredicted RBP12.45□□□□□ -0.42
NUP98-205ENST00000397007 GOPCQ9HD26 462 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
NUP98-205ENST00000397007 CCL15-CCL14A0A0B4J2E2 113 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 CA12O43570 354 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 CDC27P30260 824 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 CCL15Q16663 113 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 ZNF654Q8IZM8 581 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 SNX21Q969T3 373 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
NUP98-205ENST00000397007 TRIM75PA6NK02 468 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 PFKFB2O60825 505 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 AK2P54819 239 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 ASPRV1Q53RT3 343 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 IQCA1Q86XH1 822 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 LRRC47Q8N1G4 583 aaKnown RBP12.44□□□□□ -0.42
NUP98-205ENST00000397007 PDHXO00330 501 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 STAG2Q8N3U4 1231 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 RPAP3Q9H6T3 665 aaPredicted RBP12.44□□□□□ -0.42
NUP98-205ENST00000397007 BTBD7Q9P203 1132 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
NUP98-205ENST00000397007 USP17L15C9J2P7 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 USP17L13C9JLJ4 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 USP17L11C9JVI0 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 USP17L18D6R9N7 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 USP17L22D6RA61 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 USP17L17D6RBQ6 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 USP17L19D6RCP7 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 USP17L20D6RJB6 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 TLR2O60603 784 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 USP17L24Q0WX57 530 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 BLOC1S2Q6QNY1 142 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 VWA5AO00534 786 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 CUL4AQ13619 759 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 TMTC3Q6ZXV5 915 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 GTF3C2Q8WUA4 911 aaPredicted RBP12.43□□□□□ -0.42
NUP98-205ENST00000397007 WTAPQ15007 396 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 PPP2R5BQ15173 497 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 PKN1Q16512 942 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 SRBD1Q8N5C6 995 aaKnown RBP12.43□□□□□ -0.42
NUP98-205ENST00000397007 SMARCC2Q8TAQ2 1214 aa12.43□□□□□ -0.42
NUP98-205ENST00000397007 M0R2N6 131 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 CRHR2Q13324 411 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 RABEP1Q15276 862 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 FAM83BQ5T0W9 1011 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 GPATCH4Q5T3I0 446 aaKnown RBP12.42□□□□□ -0.42
NUP98-205ENST00000397007 FGD4Q96M96 766 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 STK36Q9NRP7 1315 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 TMEM67Q5HYA8 995 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 IFIT1BQ5T764 474 aaKnown RBP12.42□□□□□ -0.42
NUP98-205ENST00000397007 STK11IPQ8N1F8 1099 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 P2RX7Q99572 595 aaKnown RBP12.42□□□□□ -0.42
NUP98-205ENST00000397007 JMJD4Q9H9V9 463 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 BMP3P12645 472 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 TMEM132BQ14DG7 1078 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 NPY5RQ15761 445 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 ME3Q16798 604 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 TTBK2Q6IQ55 1244 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms