RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 TMEM87BQ96K49 555 aa20.17■□□□□ 0.82
HLA-A-204ENST00000396634 TM6SF1Q9BZW5 370 aa20.17■□□□□ 0.82
HLA-A-204ENST00000396634 R3HDMLQ9H3Y0 253 aa20.17■□□□□ 0.82
HLA-A-204ENST00000396634 PDRG1Q9NUG6 133 aa20.17■□□□□ 0.82
HLA-A-204ENST00000396634 COL11A1P12107 1806 aaPredicted RBP20.17■□□□□ 0.82
HLA-A-204ENST00000396634 PDHBP11177 359 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 MAP2K2P36507 400 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 TTBK2Q6IQ55 1244 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 GMCL1P1Q8NEA9 526 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 NUP133Q8WUM0 1156 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 ANKS1AQ92625 1134 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 C12orf42Q96LP6 360 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 GPCPD1Q9NPB8 672 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 ECM2O94769 699 aaPredicted RBP20.16■□□□□ 0.82
HLA-A-204ENST00000396634 SLC1A4P43007 532 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 TM4SF4P48230 202 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 MICU3Q86XE3 530 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 ZNF654Q8IZM8 581 aa20.16■□□□□ 0.82
HLA-A-204ENST00000396634 CCDC69A6NI79 296 aa20.15■□□□□ 0.82
HLA-A-204ENST00000396634 DTNBO60941 627 aa20.15■□□□□ 0.82
HLA-A-204ENST00000396634 TRPA1O75762 1119 aa20.15■□□□□ 0.82
HLA-A-204ENST00000396634 SLC16A2P36021 539 aa20.15■□□□□ 0.82
HLA-A-204ENST00000396634 CCDC178Q5BJE1 867 aa20.15■□□□□ 0.82
HLA-A-204ENST00000396634 STAG2Q8N3U4 1231 aa20.15■□□□□ 0.82
HLA-A-204ENST00000396634 IL17RAQ96F46 866 aa20.15■□□□□ 0.82
HLA-A-204ENST00000396634 ASCC2Q9H1I8 757 aaPredicted RBP20.15■□□□□ 0.82
HLA-A-204ENST00000396634 KLF18A0A0U1RQI7 1052 aa20.14■□□□□ 0.81
HLA-A-204ENST00000396634 AK2P54819 239 aa20.14■□□□□ 0.81
HLA-A-204ENST00000396634 POTEEQ6S8J3 1075 aa20.14■□□□□ 0.81
HLA-A-204ENST00000396634 ANKRD23Q86SG2 305 aa20.14■□□□□ 0.81
HLA-A-204ENST00000396634 LPAR1Q92633 364 aa20.14■□□□□ 0.81
HLA-A-204ENST00000396634 WDR19Q8NEZ3 1342 aa20.14■□□□□ 0.81
HLA-A-204ENST00000396634 TMEM232C9JQI7 657 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 WDR46O15213 610 aaKnown RBP20.13■□□□□ 0.81
HLA-A-204ENST00000396634 FLOT1O75955 427 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 NT5C2P49902 561 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 SNAP25P60880 206 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 TROAPQ12815 778 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 TAF1CQ15572 869 aaPredicted RBP20.13■□□□□ 0.81
HLA-A-204ENST00000396634 PPP4R3BQ5MIZ7 849 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 APOA5Q6Q788 366 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 P2RX7Q99572 595 aaKnown RBP20.13■□□□□ 0.81
HLA-A-204ENST00000396634 TBC1D8O95759 1140 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 BMP3P12645 472 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 LIFRP42702 1097 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 IRX3P78415 501 aaPredicted RBP20.13■□□□□ 0.81
HLA-A-204ENST00000396634 IKQ13123 557 aaPredicted RBP20.13■□□□□ 0.81
HLA-A-204ENST00000396634 CRHR2Q13324 411 aa20.13■□□□□ 0.81
HLA-A-204ENST00000396634 CMTR1Q8N1G2 835 aaKnown RBP20.13■□□□□ 0.81
HLA-A-204ENST00000396634 SMCHD1A6NHR9 2005 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 PPFIA3O75145 1194 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 CD2BP2O95400 341 aaKnown RBP20.12■□□□□ 0.81
HLA-A-204ENST00000396634 STK3Q13188 491 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 CATSPERGQ6ZRH7 1159 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 CATIPQ7Z7H3 387 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 SGMS1Q86VZ5 419 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 GMCL1Q96IK5 515 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 UBA5Q9GZZ9 404 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 RNF186Q9NXI6 227 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 DAXXQ9UER7 740 aaPredicted RBP20.12■□□□□ 0.81
HLA-A-204ENST00000396634 SLC12A7Q9Y666 1083 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 ZSWIM8A7E2V4 1837 aa20.12■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L15C9J2P7 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L13C9JLJ4 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L11C9JVI0 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L18D6R9N7 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L22D6RA61 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L17D6RBQ6 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L19D6RCP7 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L20D6RJB6 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 SNHG28P0DPA3 235 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 TAL1P17542 331 aaPredicted RBP20.11■□□□□ 0.81
HLA-A-204ENST00000396634 INHBEP58166 350 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 ZNF543Q08ER8 600 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 USP17L24Q0WX57 530 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 KIFC2Q96AC6 838 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 ATG4CQ96DT6 458 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 GOLGA8BA8MQT2 603 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 LARGE1O95461 756 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 NFKBIBQ15653 356 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 NBPF11Q86T75 865 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 SMCR8Q8TEV9 937 aaPredicted RBP20.11■□□□□ 0.81
HLA-A-204ENST00000396634 DCAF4Q8WV16 495 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 AGXT2Q9BYV1 514 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 CPA4Q9UI42 421 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 MAD2L2Q9UI95 211 aa20.11■□□□□ 0.81
HLA-A-204ENST00000396634 MYH6P13533 1939 aa20.1■□□□□ 0.81
HLA-A-204ENST00000396634 SPDYE16A6NNV3 312 aaPredicted RBP20.1■□□□□ 0.81
HLA-A-204ENST00000396634 HOXA7P31268 230 aaPredicted RBP20.1■□□□□ 0.81
HLA-A-204ENST00000396634 SLC35G1Q2M3R5 365 aa20.1■□□□□ 0.81
HLA-A-204ENST00000396634 MTA3Q9BTC8 594 aa20.1■□□□□ 0.81
HLA-A-204ENST00000396634 PAGR1Q9BTK6 254 aa20.1■□□□□ 0.81
HLA-A-204ENST00000396634 NCOA5Q9HCD5 579 aaKnown RBP20.1■□□□□ 0.81
HLA-A-204ENST00000396634 TPCN1Q9ULQ1 816 aa20.1■□□□□ 0.81
HLA-A-204ENST00000396634 SYNPO2Q9UMS6 1093 aa20.1■□□□□ 0.81
HLA-A-204ENST00000396634 CENPFP49454 3210 aa20.1■□□□□ 0.81
HLA-A-204ENST00000396634 PLEKHA8P1O95397 391 aa20.09■□□□□ 0.81
HLA-A-204ENST00000396634 PARP1P09874 1014 aaKnown RBP20.09■□□□□ 0.81
HLA-A-204ENST00000396634 HERVK_113P62684 666 aa20.09■□□□□ 0.81
HLA-A-204ENST00000396634 CCDC82Q8N4S0 544 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms