RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 CALM2P0DP24 149 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 CALM3P0DP25 149 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 MCM6Q14566 821 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 TFRCP02786 760 aaKnown RBP16.28■□□□□ 0.2
SREBF1-205ENST00000395757 TRIM21P19474 475 aaKnown RBP16.28■□□□□ 0.2
SREBF1-205ENST00000395757 CDC25BP30305 580 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 STIM1Q13586 685 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 AMIGO3Q86WK7 504 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 IMPACTQ9P2X3 320 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 TFR2Q9UP52 801 aa16.28■□□□□ 0.2
SREBF1-205ENST00000395757 KRT9P35527 623 aa16.27■□□□□ 0.2
SREBF1-205ENST00000395757 SNAP25P60880 206 aa16.27■□□□□ 0.2
SREBF1-205ENST00000395757 PHACTR2O75167 634 aa16.27■□□□□ 0.2
SREBF1-205ENST00000395757 TRIM37O94972 964 aa16.27■□□□□ 0.2
SREBF1-205ENST00000395757 VSTM4Q8IW00 320 aa16.27■□□□□ 0.2
SREBF1-205ENST00000395757 SRRTQ9BXP5 876 aaKnown RBP16.27■□□□□ 0.2
SREBF1-205ENST00000395757 MRC1P22897 1456 aa16.27■□□□□ 0.2
SREBF1-205ENST00000395757 TNS2Q63HR2 1409 aa16.27■□□□□ 0.19
SREBF1-205ENST00000395757 SMCO2A6NFE2 343 aa16.27■□□□□ 0.19
SREBF1-205ENST00000395757 LDHCP07864 332 aa16.27■□□□□ 0.19
SREBF1-205ENST00000395757 PPP1R1BQ9UD71 204 aaPredicted RBP16.27■□□□□ 0.19
SREBF1-205ENST00000395757 A0A0U1RQJ8 604 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 PARP1P09874 1014 aaKnown RBP16.26■□□□□ 0.19
SREBF1-205ENST00000395757 CD44P16070 742 aaKnown RBP16.26■□□□□ 0.19
SREBF1-205ENST00000395757 TROAPQ12815 778 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 RGS22Q8NE09 1264 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 ATRIPQ8WXE1 791 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 DEF6Q9H4E7 631 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.194e-7■■□□□ 13.7
SREBF1-205ENST00000395757 CCP110O43303 1012 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-205ENST00000395757 WDR24Q96S15 920 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 ZC3H12CQ9C0D7 883 aaKnown RBP16.26■□□□□ 0.19
SREBF1-205ENST00000395757 DCCP43146 1447 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 KIF2AO00139 706 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-205ENST00000395757 IKBKBO14920 756 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 CCDC175P0C221 793 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 PDE4DQ08499 809 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 ERO1AQ96HE7 468 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 PIGSQ96S52 555 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 SCN11AQ9UI33 1791 aa16.26■□□□□ 0.19
SREBF1-205ENST00000395757 KIAA0825Q8IV33 1275 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 TIGD1Q96MW7 591 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 PNPLA7Q6ZV29 1317 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 ENC1O14682 589 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 PRPF3O43395 683 aaKnown RBP16.25■□□□□ 0.19
SREBF1-205ENST00000395757 SLFN14P0C7P3 912 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 TNNT3P45378 269 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-205ENST00000395757 PAK1Q13153 545 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 PKN1Q16512 942 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 SLC39A2Q9NP94 309 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 TMEM260Q9NX78 707 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 ST5P78524 1137 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 PTPROQ16827 1216 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 KMT5BQ4FZB7 885 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 DPP8Q6V1X1 898 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-205ENST00000395757 ZNF397Q8NF99 534 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-205ENST00000395757 MMRN2Q9H8L6 949 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 EXOC1Q9NV70 894 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 ARPP21Q9UBL0 812 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-205ENST00000395757 NARFQ9UHQ1 456 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 KCPQ6ZWJ8 1503 aa16.25■□□□□ 0.19
SREBF1-205ENST00000395757 ARHGAP6O43182 974 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 CALML3P27482 149 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 MRPS25P82663 173 aaKnown RBP16.24■□□□□ 0.19
SREBF1-205ENST00000395757 SEC23AQ15436 765 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 WDR66Q8TBY9 1149 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 ZNF384Q8TF68 577 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 ZNF512BQ96KM6 892 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-205ENST00000395757 HPSEQ9Y251 543 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 MACROD2A1Z1Q3 448 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 LRRC41Q15345 812 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 TMEM60Q9H2L4 133 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 TUBE1Q9UJT0 475 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 ARFGEF2Q9Y6D5 1785 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 MORC3Q14149 939 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 ZYXQ15942 572 aaKnown RBP16.24■□□□□ 0.19
SREBF1-205ENST00000395757 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
SREBF1-205ENST00000395757 UBE2SQ16763 222 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 KCTD1Q719H9 257 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 RRP36Q96EU6 259 aaKnown RBP16.23■□□□□ 0.19
SREBF1-205ENST00000395757 OSBPL5Q9H0X9 879 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-205ENST00000395757 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 TTF2Q9UNY4 1162 aaKnown RBP16.23■□□□□ 0.19
SREBF1-205ENST00000395757 RPS6KA4O75676 772 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 PPP2R3AQ06190 1150 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 CSGALNACT2Q8N6G5 542 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 DBNDD1Q9H9R9 158 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 RPN1P04843 607 aaKnown RBP16.23■□□□□ 0.19
SREBF1-205ENST00000395757 SERPINB2P05120 415 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 WWC2Q6AWC2 1192 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.23■□□□□ 0.19
SREBF1-205ENST00000395757 ZNHIT6Q9NWK9 470 aaKnown RBP16.23■□□□□ 0.19
SREBF1-205ENST00000395757 FAM205AQ6ZU69 1335 aa16.23■□□□□ 0.19
SREBF1-205ENST00000395757 KIF1AQ12756 1690 aa16.22■□□□□ 0.19
SREBF1-205ENST00000395757 KCNJ18B7U540 433 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms