RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 MMP1P03956 469 aa15.18■□□□□ 0.02
VPS26A-203ENST00000395098 SCG2P13521 617 aa15.18■□□□□ 0.02
VPS26A-203ENST00000395098 TRIM29Q14134 588 aa15.18■□□□□ 0.02
VPS26A-203ENST00000395098 CCDC96Q2M329 555 aa15.18■□□□□ 0.02
VPS26A-203ENST00000395098 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-203ENST00000395098 RGS22Q8NE09 1264 aa15.18■□□□□ 0.02
VPS26A-203ENST00000395098 GMCL1P1Q8NEA9 526 aa15.18■□□□□ 0.02
VPS26A-203ENST00000395098 GPKOWQ92917 476 aaPredicted RBP eCLIP15.18■□□□□ 0.022e-6■■□□□ 13
VPS26A-203ENST00000395098 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
VPS26A-203ENST00000395098 TAF1DQ9H5J8 278 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-203ENST00000395098 LMBRD1Q9NUN5 540 aa15.18■□□□□ 0.02
VPS26A-203ENST00000395098 PRPF40AO75400 957 aaKnown RBP15.17■□□□□ 0.02
VPS26A-203ENST00000395098 ASNSP08243 561 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
VPS26A-203ENST00000395098 SLC16A2P36021 539 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 RIOX1Q9H6W3 641 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 TFIP11Q9UBB9 837 aaKnown RBP15.17■□□□□ 0.02
VPS26A-203ENST00000395098 TMX2Q9Y320 296 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 POLR2AP24928 1970 aaKnown RBP15.17■□□□□ 0.02
VPS26A-203ENST00000395098 CTNND1O60716 968 aaKnown RBP15.17■□□□□ 0.02
VPS26A-203ENST00000395098 SLC1A4P43007 532 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 DCAF15Q66K64 600 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 TYW1BQ6NUM6 668 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 ZKSCAN4Q969J2 545 aaPredicted RBP15.17■□□□□ 0.02
VPS26A-203ENST00000395098 PIGSQ96S52 555 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 ZNF341Q9BYN7 854 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 FTOQ9C0B1 505 aaKnown RBP eCLIP15.17■□□□□ 0.02
VPS26A-203ENST00000395098 ZNF112Q9UJU3 913 aa15.17■□□□□ 0.02
VPS26A-203ENST00000395098 BTBD18B2RXH4 712 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 ADAMTS3O15072 1205 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 FIBPO43427 364 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 PRKG1Q13976 671 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 NPY5RQ15761 445 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 HOMER1Q86YM7 354 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 SULF1Q8IWU6 871 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 DCAF4Q8WV16 495 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 PHF20Q9BVI0 1012 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 ARHGEF10LQ9HCE6 1279 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 SMARCA1P28370 1054 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 ZYXQ15942 572 aaKnown RBP15.16■□□□□ 0.02
VPS26A-203ENST00000395098 EAPPQ56P03 285 aaPredicted RBP15.16■□□□□ 0.02
VPS26A-203ENST00000395098 GPATCH4Q5T3I0 446 aaKnown RBP15.16■□□□□ 0.02
VPS26A-203ENST00000395098 WWC2Q6AWC2 1192 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 KRT26Q7Z3Y9 468 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 USP48Q86UV5 1035 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 DIS3L2Q8IYB7 885 aaKnown RBP15.16■□□□□ 0.02
VPS26A-203ENST00000395098 WRNIP1Q96S55 665 aa15.16■□□□□ 0.02
VPS26A-203ENST00000395098 ISY1Q9ULR0 285 aaKnown RBP15.16■□□□□ 0.02
VPS26A-203ENST00000395098 GOLGA6L22H0YM25 854 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 U2AF2P26368 475 aaKnown RBP eCLIP15.15■□□□□ 0.02
VPS26A-203ENST00000395098 NR5A1Q13285 461 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 ADGRF4Q8IZF3 695 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 KLRG1Q96E93 195 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 GMCL1Q96IK5 515 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 JMJD4Q9H9V9 463 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 MYH6P13533 1939 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 POTEJP0CG39 1038 aa15.15■□□□□ 0.02
VPS26A-203ENST00000395098 RBM27Q9P2N5 1060 aaKnown RBP15.15■□□□□ 0.02
VPS26A-203ENST00000395098 TCHHQ07283 1943 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 IQCA1LA6NCM1 817 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 KRT85P78386 507 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 SUPT20HL1Q3ZLR7 823 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 HEATR3Q7Z4Q2 680 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 ZC3H15Q8WU90 426 aaKnown RBP15.14■□□□□ 0.01
VPS26A-203ENST00000395098 HOOK2Q96ED9 719 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 RRP36Q96EU6 259 aaKnown RBP15.14■□□□□ 0.01
VPS26A-203ENST00000395098 SYNPO2Q9UMS6 1093 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 GADD45BO75293 160 aaPredicted RBP15.14■□□□□ 0.01
VPS26A-203ENST00000395098 USP2O75604 605 aaPredicted RBP15.14■□□□□ 0.01
VPS26A-203ENST00000395098 CEBPZQ03701 1054 aaKnown RBP15.14■□□□□ 0.01
VPS26A-203ENST00000395098 DGKZQ13574 1117 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 BRAPQ7Z569 592 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 SCYL3Q8IZE3 742 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 USP28Q96RU2 1077 aa15.14■□□□□ 0.01
VPS26A-203ENST00000395098 STXBP3O00186 592 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 BMP3P12645 472 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 XBP1P17861 261 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 MYSM1Q5VVJ2 828 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 TMEM87AQ8NBN3 555 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 VCPKMTQ9H867 229 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 ATAD5Q96QE3 1844 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 WDR90Q96KV7 1748 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 TMEM232C9JQI7 657 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 PPP1R11O60927 126 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-203ENST00000395098 GNL2Q13823 731 aaKnown RBP15.13■□□□□ 0.01
VPS26A-203ENST00000395098 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
VPS26A-203ENST00000395098 EARS2Q5JPH6 523 aaKnown RBP15.13■□□□□ 0.01
VPS26A-203ENST00000395098 BARHL2Q9NY43 387 aa15.13■□□□□ 0.01
VPS26A-203ENST00000395098 FAM205CA6NFA0 338 aa15.12■□□□□ 0.01
VPS26A-203ENST00000395098 TRAK2O60296 914 aa15.12■□□□□ 0.01
VPS26A-203ENST00000395098 SAFBQ15424 915 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS26A-203ENST00000395098 FAM83BQ5T0W9 1011 aa15.12■□□□□ 0.01
VPS26A-203ENST00000395098 NOSTRINQ8IVI9 506 aa15.12■□□□□ 0.01
VPS26A-203ENST00000395098 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.12■□□□□ 0.019e-8■□□□□ 8.4
VPS26A-203ENST00000395098 MTMR8Q96EF0 704 aa15.12■□□□□ 0.01
VPS26A-203ENST00000395098 FOXP1Q9H334 677 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms