RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TFCP2L1Q9NZI6 479 aa17.62■□□□□ 0.41
PTBP1-204ENST00000394601 THSD7AQ9UPZ6 1657 aa17.62■□□□□ 0.41
PTBP1-204ENST00000394601 CATIPQ7Z7H3 387 aa17.62■□□□□ 0.41
PTBP1-204ENST00000394601 TRMT44Q8IYL2 757 aaKnown RBP17.62■□□□□ 0.41
PTBP1-204ENST00000394601 TC2NQ8N9U0 490 aa17.62■□□□□ 0.41
PTBP1-204ENST00000394601 SAMSN1Q9NSI8 373 aaKnown RBP17.62■□□□□ 0.41
PTBP1-204ENST00000394601 NFE2L3Q9Y4A8 694 aa17.62■□□□□ 0.41
PTBP1-204ENST00000394601 CASP1P29466 404 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 DPYDQ12882 1025 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 NR1I3Q14994 352 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 RC3H1Q5TC82 1133 aaKnown RBP17.61■□□□□ 0.41
PTBP1-204ENST00000394601 SYMPKQ92797 1274 aaKnown RBP17.61■□□□□ 0.41
PTBP1-204ENST00000394601 PAGE5Q96GU1 130 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 MTRQ99707 1265 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 DESI2Q9BSY9 194 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 CEP131Q9UPN4 1083 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 TRIM75PA6NK02 468 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 CBFA2T2O43439 604 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 N4BP1O75113 896 aaKnown RBP17.61■□□□□ 0.41
PTBP1-204ENST00000394601 FAM193AP78312 1265 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 FAM98CQ17RN3 349 aaKnown RBP17.61■□□□□ 0.41
PTBP1-204ENST00000394601 SLC35G1Q2M3R5 365 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 PDE11AQ9HCR9 933 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 IL17RBQ9NRM6 502 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 RHOXF2BP0C7M4 288 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 ATP2C1P98194 919 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-204ENST00000394601 TTC31Q49AM3 519 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-204ENST00000394601 FAM47AQ5JRC9 791 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 RHOXF2Q9BQY4 288 aa17.61■□□□□ 0.41
PTBP1-204ENST00000394601 TFRCP02786 760 aaKnown RBP17.6■□□□□ 0.41
PTBP1-204ENST00000394601 ATP2B1P20020 1258 aa17.6■□□□□ 0.41
PTBP1-204ENST00000394601 IRX2Q9BZI1 471 aaPredicted RBP17.6■□□□□ 0.41
PTBP1-204ENST00000394601 NUTM2BA6NNL0 878 aaPredicted RBP17.6■□□□□ 0.41
PTBP1-204ENST00000394601 NUTM2EB1AL46 878 aaPredicted RBP17.6■□□□□ 0.41
PTBP1-204ENST00000394601 HIBADHP31937 336 aaKnown RBP17.6■□□□□ 0.41
PTBP1-204ENST00000394601 PLCD1P51178 756 aa17.6■□□□□ 0.41
PTBP1-204ENST00000394601 NUTM2AQ8IVF1 878 aaPredicted RBP17.6■□□□□ 0.41
PTBP1-204ENST00000394601 CCDC24Q8N4L8 307 aa17.6■□□□□ 0.41
PTBP1-204ENST00000394601 C4orf32Q8N8J7 132 aa17.6■□□□□ 0.41
PTBP1-204ENST00000394601 FAM53CQ9NYF3 392 aa17.6■□□□□ 0.41
PTBP1-204ENST00000394601 JRKLQ9Y4A0 524 aa17.6■□□□□ 0.41
PTBP1-204ENST00000394601 A0A1B0GTH6 734 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 M0R2N6 131 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 KIF2AO00139 706 aaPredicted RBP17.59■□□□□ 0.41
PTBP1-204ENST00000394601 RPS6KA4O75676 772 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 CALM1P0DP23 149 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 CALM2P0DP24 149 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 CALM3P0DP25 149 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 PBX1P40424 430 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 IQCA1Q86XH1 822 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 ATP8A2Q9NTI2 1148 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 NAV1Q8NEY1 1877 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 VWA3AA6NCI4 1184 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 PPP1R3GB7ZBB8 358 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 ERCC5P28715 1186 aaPredicted RBP17.59■□□□□ 0.41
PTBP1-204ENST00000394601 CPLX3Q8WVH0 158 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 ETF1P62495 437 aaKnown RBP17.59■□□□□ 0.41
PTBP1-204ENST00000394601 GRIK5Q16478 980 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 KANK3Q6NY19 840 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 DEF6Q9H4E7 631 aa17.59■□□□□ 0.41
PTBP1-204ENST00000394601 XDHP47989 1333 aa17.58■□□□□ 0.41
PTBP1-204ENST00000394601 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
PTBP1-204ENST00000394601 CDKAL1Q5VV42 579 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 ICE2Q659A1 982 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 MICALL1Q8N3F8 863 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 DHX58Q96C10 678 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 LZTFL1Q9NQ48 299 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 ROBO3Q96MS0 1386 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 H3BQF6 201 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 TBC1D8O95759 1140 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 ZNF174Q15697 407 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 PDXDC2PQ6P474 469 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 SRLQ86TD4 932 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 FERMT2Q96AC1 680 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 FAM212AQ96EL1 285 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 PARD6BQ9BYG5 372 aa17.58■□□□□ 0.4
PTBP1-204ENST00000394601 HOOK1Q9UJC3 728 aaKnown RBP17.58■□□□□ 0.4
PTBP1-204ENST00000394601 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
PTBP1-204ENST00000394601 PTGDRQ13258 359 aa17.57■□□□□ 0.4
PTBP1-204ENST00000394601 FAM205AQ6ZU69 1335 aa17.57■□□□□ 0.4
PTBP1-204ENST00000394601 TYW1BQ6NUM6 668 aa17.57■□□□□ 0.4
PTBP1-204ENST00000394601 PACS2Q86VP3 889 aa17.57■□□□□ 0.4
PTBP1-204ENST00000394601 FCHSD1Q86WN1 690 aa17.57■□□□□ 0.4
PTBP1-204ENST00000394601 CCDC12Q8WUD4 166 aaPredicted RBP17.57■□□□□ 0.4
PTBP1-204ENST00000394601 ANKS1AQ92625 1134 aa17.57■□□□□ 0.4
PTBP1-204ENST00000394601 NYXQ9GZU5 481 aa17.57■□□□□ 0.4
PTBP1-204ENST00000394601 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
PTBP1-204ENST00000394601 PHLPP2Q6ZVD8 1323 aa17.57■□□□□ 0.4
PTBP1-204ENST00000394601 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 TTC38Q5R3I4 469 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 JAG2Q9Y219 1238 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 SCG2P13521 617 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 VPS72Q15906 364 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 CT47A1Q5JQC4 288 aaPredicted RBP17.56■□□□□ 0.4
PTBP1-204ENST00000394601 SPECC1LQ69YQ0 1117 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 CC2D1AQ6P1N0 951 aaPredicted RBP17.56■□□□□ 0.4
PTBP1-204ENST00000394601 CRNKL1Q9BZJ0 848 aaKnown RBP17.56■□□□□ 0.4
PTBP1-204ENST00000394601 ANKRD2Q9GZV1 360 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 TEX33O43247 280 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms