RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 FUT2Q10981 343 aa20.91■□□□□ 0.94
TRAF3-203ENST00000392745 CFAP100Q494V2 611 aa20.91■□□□□ 0.94
TRAF3-203ENST00000392745 SLF2Q8IX21 1173 aa20.91■□□□□ 0.94
TRAF3-203ENST00000392745 KCNQ5Q9NR82 932 aa20.91■□□□□ 0.94
TRAF3-203ENST00000392745 ZNF219Q9P2Y4 722 aaPredicted RBP20.91■□□□□ 0.94
TRAF3-203ENST00000392745 ROBO3Q96MS0 1386 aa20.91■□□□□ 0.94
TRAF3-203ENST00000392745 CCP110O43303 1012 aa20.9■□□□□ 0.94
TRAF3-203ENST00000392745 PPP2R5BQ15173 497 aa20.9■□□□□ 0.94
TRAF3-203ENST00000392745 CERS3Q8IU89 383 aa20.9■□□□□ 0.94
TRAF3-203ENST00000392745 PLEKHA8P1O95397 391 aa20.9■□□□□ 0.94
TRAF3-203ENST00000392745 HNRNPH2P55795 449 aaKnown RBP20.9■□□□□ 0.94
TRAF3-203ENST00000392745 DEFB132Q7Z7B7 95 aa20.9■□□□□ 0.94
TRAF3-203ENST00000392745 WASF1Q92558 559 aa20.9■□□□□ 0.94
TRAF3-203ENST00000392745 FLT1P17948 1338 aa20.9■□□□□ 0.94
TRAF3-203ENST00000392745 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
TRAF3-203ENST00000392745 MYH1P12882 1939 aa20.9■□□□□ 0.94
TRAF3-203ENST00000392745 DEXIO95424 95 aa20.89■□□□□ 0.94
TRAF3-203ENST00000392745 SYKP43405 635 aa20.89■□□□□ 0.94
TRAF3-203ENST00000392745 PNOCQ13519 176 aa20.89■□□□□ 0.94
TRAF3-203ENST00000392745 TRIM29Q14134 588 aa20.89■□□□□ 0.94
TRAF3-203ENST00000392745 DBNDD1Q9H9R9 158 aa20.89■□□□□ 0.94
TRAF3-203ENST00000392745 MKNK2Q9HBH9 465 aa20.89■□□□□ 0.94
TRAF3-203ENST00000392745 TUBE1Q9UJT0 475 aa20.89■□□□□ 0.94
TRAF3-203ENST00000392745 KCNJ14Q9UNX9 436 aa20.89■□□□□ 0.94
TRAF3-203ENST00000392745 VWA3AA6NCI4 1184 aa20.89■□□□□ 0.93
TRAF3-203ENST00000392745 PLCG2P16885 1265 aa20.89■□□□□ 0.93
TRAF3-203ENST00000392745 MYL5Q02045 173 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 VSTM4Q8IW00 320 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 AMOTL1Q8IY63 956 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.88■□□□□ 0.93
TRAF3-203ENST00000392745 TTF2Q9UNY4 1162 aaKnown RBP20.88■□□□□ 0.93
TRAF3-203ENST00000392745 SUGT1Q9Y2Z0 365 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 QSER1Q2KHR3 1735 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 EFCAB8A8MWE9 144 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 SASH3O75995 380 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 DDAH1O94760 285 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 SLC39A14Q15043 492 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 TMEM139Q8IV31 216 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 SHISA4Q96DD7 197 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 TRERF1Q96PN7 1200 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 EYA3Q99504 573 aa20.88■□□□□ 0.93
TRAF3-203ENST00000392745 SRRTQ9BXP5 876 aaKnown RBP20.88■□□□□ 0.93
TRAF3-203ENST00000392745 RNF26Q9BY78 433 aaPredicted RBP20.88■□□□□ 0.93
TRAF3-203ENST00000392745 hCG_1642624A0A1W2PR95 340 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 USP17L3A6NCW0 530 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 USP17L4A6NCW7 530 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 G3V3G9 751 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 CALM1P0DP23 149 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 CALM2P0DP24 149 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 CALM3P0DP25 149 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 PKN1Q16512 942 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 DCAF8Q5TAQ9 597 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 USP17L1Q7RTZ2 530 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 DDX60LQ5H9U9 1706 aaKnown RBP20.87■□□□□ 0.93
TRAF3-203ENST00000392745 BTBD18B2RXH4 712 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 CBFA2T2O43439 604 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 MMP1P03956 469 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 TOP1P11387 765 aaKnown RBP20.87■□□□□ 0.93
TRAF3-203ENST00000392745 RASA1P20936 1047 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 SCNN1DP51172 638 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 SHC4Q6S5L8 630 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 C7orf43Q8WVR3 580 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 FANCLQ9NW38 375 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 FOCADQ5VW36 1801 aa20.87■□□□□ 0.93
TRAF3-203ENST00000392745 HSP90AA4PQ58FG1 418 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 ZNF444Q8N0Y2 327 aaPredicted RBP20.86■□□□□ 0.93
TRAF3-203ENST00000392745 NEK11Q8NG66 645 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 WDR24Q96S15 920 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 ZCCHC17Q9NP64 241 aaKnown RBP20.86■□□□□ 0.93
TRAF3-203ENST00000392745 INTS13Q9NVM9 706 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 RBM28Q9NW13 759 aaKnown RBP20.86■□□□□ 0.93
TRAF3-203ENST00000392745 PPP2R2CQ9Y2T4 447 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 V9GY48 417 aaPredicted RBP20.86■□□□□ 0.93
TRAF3-203ENST00000392745 SCN9AQ15858 1988 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 TBC1D8O95759 1140 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 CAPN2P17655 700 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 GNL2Q13823 731 aaKnown RBP20.86■□□□□ 0.93
TRAF3-203ENST00000392745 PODNQ7Z5L7 613 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 HPSEQ9Y251 543 aa20.86■□□□□ 0.93
TRAF3-203ENST00000392745 PRPF3O43395 683 aaKnown RBP20.85■□□□□ 0.93
TRAF3-203ENST00000392745 CDK8P49336 464 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 TMTC3Q6ZXV5 915 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 DGKHQ86XP1 1220 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 SRBD1Q8N5C6 995 aaKnown RBP20.85■□□□□ 0.93
TRAF3-203ENST00000392745 CNKSR1Q969H4 720 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 CLIC6Q96NY7 704 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 ADAMTSL1Q8N6G6 1762 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 TULP2O00295 520 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 TSPY3P0CV98 308 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 TSPY8P0CW00 308 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 C16orf86Q6ZW13 317 aa20.85■□□□□ 0.93
TRAF3-203ENST00000392745 ZSCAN12O43309 604 aa20.84■□□□□ 0.93
TRAF3-203ENST00000392745 FOXP4Q8IVH2 680 aaPredicted RBP20.84■□□□□ 0.93
TRAF3-203ENST00000392745 DIS3L2Q8IYB7 885 aaKnown RBP20.84■□□□□ 0.93
TRAF3-203ENST00000392745 ANKS1AQ92625 1134 aa20.84■□□□□ 0.93
TRAF3-203ENST00000392745 UBXN6Q9BZV1 441 aa20.84■□□□□ 0.93
TRAF3-203ENST00000392745 CC2D1AQ6P1N0 951 aaPredicted RBP20.84■□□□□ 0.93
TRAF3-203ENST00000392745 METTL16Q86W50 562 aaKnown RBP20.84■□□□□ 0.93
TRAF3-203ENST00000392745 CTCFLQ8NI51 663 aaPredicted RBP20.84■□□□□ 0.93
TRAF3-203ENST00000392745 MAP3K14Q99558 947 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms