RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 ASPRV1Q53RT3 343 aa24.52■■□□□ 1.52
SPHK1-202ENST00000392496 MTMR14Q8NCE2 650 aa24.52■■□□□ 1.52
SPHK1-202ENST00000392496 USP17L5A8MUK1 530 aa24.51■■□□□ 1.51
SPHK1-202ENST00000392496 MPHOSPH10O00566 681 aaKnown RBP24.51■■□□□ 1.51
SPHK1-202ENST00000392496 GPR162Q16538 588 aa24.51■■□□□ 1.51
SPHK1-202ENST00000392496 CERKLQ49MI3 558 aaPredicted RBP24.51■■□□□ 1.51
SPHK1-202ENST00000392496 RNF214Q8ND24 703 aa24.51■■□□□ 1.51
SPHK1-202ENST00000392496 CCDC148Q8NFR7 591 aa24.51■■□□□ 1.51
SPHK1-202ENST00000392496 ZBTB12Q9Y330 459 aaPredicted RBP24.51■■□□□ 1.51
SPHK1-202ENST00000392496 FAM237AA0A1B0GTK4 181 aa24.5■■□□□ 1.51
SPHK1-202ENST00000392496 NDUFA8P51970 172 aa24.5■■□□□ 1.51
SPHK1-202ENST00000392496 CXCL9Q07325 125 aa24.5■■□□□ 1.51
SPHK1-202ENST00000392496 GALNT17Q6IS24 598 aa24.5■■□□□ 1.51
SPHK1-202ENST00000392496 CKAP2LQ8IYA6 745 aa24.5■■□□□ 1.51
SPHK1-202ENST00000392496 LRRC47Q8N1G4 583 aaKnown RBP24.5■■□□□ 1.51
SPHK1-202ENST00000392496 BARHL2Q9NY43 387 aa24.5■■□□□ 1.51
SPHK1-202ENST00000392496 PCDHB6Q9Y5E3 794 aa24.5■■□□□ 1.51
SPHK1-202ENST00000392496 MYH4Q9Y623 1939 aa24.5■■□□□ 1.51
SPHK1-202ENST00000392496 TYRO3Q06418 890 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 RASGRP2Q7LDG7 609 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 KRI1Q8N9T8 703 aaKnown RBP24.49■■□□□ 1.51
SPHK1-202ENST00000392496 JDP2Q8WYK2 163 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 ZNF70Q9UC06 446 aaPredicted RBP24.49■■□□□ 1.51
SPHK1-202ENST00000392496 PCDHA4Q9UN74 947 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 TRIM75PA6NK02 468 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 BMP15O95972 392 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 CCDC173Q0VFZ6 552 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 EARS2Q5JPH6 523 aaKnown RBP24.49■■□□□ 1.51
SPHK1-202ENST00000392496 WWC2Q6AWC2 1192 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 CIAPIN1Q6FI81 312 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 DAGLBQ8NCG7 672 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 GPKOWQ92917 476 aaPredicted RBP eCLIP24.49■■□□□ 1.51
SPHK1-202ENST00000392496 RRP36Q96EU6 259 aaKnown RBP24.49■■□□□ 1.51
SPHK1-202ENST00000392496 RIOX1Q9H6W3 641 aa24.49■■□□□ 1.51
SPHK1-202ENST00000392496 FAM205CA6NFA0 338 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 STXBP3O00186 592 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 NFKBIEO00221 500 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 SLURP2P0DP57 97 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 PFKFB1P16118 471 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 TRAPPC10P48553 1259 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 MMP14P50281 582 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 EIF6P56537 245 aaKnown RBP24.48■■□□□ 1.51
SPHK1-202ENST00000392496 SPDYE2Q495Y8 402 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 FKBP1CQ5VVH2 108 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 RESP18Q5W5W9 173 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 CLEC10AQ8IUN9 316 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 BLIDQ8IZY5 108 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 MKL1Q969V6 931 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 KANSL2Q9H9L4 492 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 NYAP2Q9P242 653 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 HPSEQ9Y251 543 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 LTBP3Q9NS15 1303 aa24.48■■□□□ 1.51
SPHK1-202ENST00000392496 FAM196BA6NMK8 535 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 GRIN3BO60391 1043 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 PTPREP23469 700 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 SHC4Q6S5L8 630 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 SASS6Q6UVJ0 657 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 CCDC12Q8WUD4 166 aaPredicted RBP24.47■■□□□ 1.51
SPHK1-202ENST00000392496 FAM151AQ8WW52 585 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 PPP1R9BQ96SB3 815 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 TMEM179Q6ZVK1 233 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 HEATR3Q7Z4Q2 680 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 SEC63Q9UGP8 760 aaKnown RBP24.47■■□□□ 1.51
SPHK1-202ENST00000392496 HERC5Q9UII4 1024 aaKnown RBP24.47■■□□□ 1.51
SPHK1-202ENST00000392496 FBXO2Q9UK22 296 aaPredicted RBP24.47■■□□□ 1.51
SPHK1-202ENST00000392496 MRVI1Q9Y6F6 885 aa24.47■■□□□ 1.51
SPHK1-202ENST00000392496 hCG_1984214I3L0E3 225 aa24.46■■□□□ 1.51
SPHK1-202ENST00000392496 ZNF202O95125 648 aa24.46■■□□□ 1.51
SPHK1-202ENST00000392496 ZNF543Q08ER8 600 aa24.46■■□□□ 1.51
SPHK1-202ENST00000392496 TNIP1Q15025 636 aa24.46■■□□□ 1.51
SPHK1-202ENST00000392496 TYW1BQ6NUM6 668 aa24.46■■□□□ 1.51
SPHK1-202ENST00000392496 ZNF713Q8N859 430 aaPredicted RBP24.46■■□□□ 1.51
SPHK1-202ENST00000392496 ZNF579Q8NAF0 562 aaKnown RBP24.46■■□□□ 1.51
SPHK1-202ENST00000392496 ZBED3Q96IU2 234 aaPredicted RBP24.46■■□□□ 1.51
SPHK1-202ENST00000392496 TIGD1Q96MW7 591 aa24.46■■□□□ 1.51
SPHK1-202ENST00000392496 CSRNP1Q96S65 589 aa24.46■■□□□ 1.51
SPHK1-202ENST00000392496 CPVLQ9H3G5 476 aa24.46■■□□□ 1.51
SPHK1-202ENST00000392496 SRPRBQ9Y5M8 271 aaKnown RBP24.46■■□□□ 1.51
SPHK1-202ENST00000392496 TCP10L2B9ZVM9 353 aa24.45■■□□□ 1.5
SPHK1-202ENST00000392496 ATP2B1P20020 1258 aa24.45■■□□□ 1.5
SPHK1-202ENST00000392496 GPATCH4Q5T3I0 446 aaKnown RBP24.45■■□□□ 1.5
SPHK1-202ENST00000392496 CLIC6Q96NY7 704 aa24.45■■□□□ 1.5
SPHK1-202ENST00000392496 FRMPD2Q68DX3 1309 aaPredicted RBP24.45■■□□□ 1.5
SPHK1-202ENST00000392496 ARFGEF1Q9Y6D6 1849 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 CLRN2A0PK11 232 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 M0R2N6 131 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 SYKP43405 635 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 ATP2B2Q01814 1243 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 ABCB5Q2M3G0 1257 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 TTC38Q5R3I4 469 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 PIK3AP1Q6ZUJ8 805 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 PIGSQ96S52 555 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 SDF4Q9BRK5 362 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 UBA5Q9GZZ9 404 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 ZMYND12Q9H0C1 365 aa24.44■■□□□ 1.5
SPHK1-202ENST00000392496 GOLGB1Q14789 3259 aaKnown RBP24.43■■□□□ 1.5
SPHK1-202ENST00000392496 CNTNAP1P78357 1384 aa24.43■■□□□ 1.5
SPHK1-202ENST00000392496 EEF2P13639 858 aaKnown RBP24.43■■□□□ 1.5
SPHK1-202ENST00000392496 NOM1Q5C9Z4 860 aaKnown RBP24.43■■□□□ 1.5
SPHK1-202ENST00000392496 ARHGAP27Q6ZUM4 889 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms