RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GRIN3BO60391 1043 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 BUB1BO60566 1050 aaPredicted RBP3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 KIR2DL1P43626 348 aaPredicted RBP3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 KIR2DL2P43627 348 aaPredicted RBP3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 ADAM17P78536 824 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 ZNF827Q17R98 1081 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 ZPBP2Q6X784 338 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 SV2BQ7L1I2 683 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 TMC6Q7Z403 805 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 WAPLQ7Z5K2 1190 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 USHBP1Q8N6Y0 703 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 HHIPL1Q96JK4 782 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 SORCS2Q96PQ0 1159 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 CORINQ9Y5Q5 1042 aa3.36□□□□□ -1.87
RNU6-239P-201ENST00000390990 A0A1B0GTL3 188 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 TMEM82A0PJX8 343 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 ABLIM1O14639 778 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 TREHO43280 583 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 USP17L7P0C7H9 530 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 LIMS1P48059 325 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 B4GALNT3Q6L9W6 998 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 RNF111Q6ZNA4 994 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 CCDC82Q8N4S0 544 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 FOXP3Q9BZS1 431 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 SCAND2PQ9GZW5 306 aaPredicted RBP3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 SRRDQ9UH36 339 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 ADAM30Q9UKF2 790 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 WWC3Q9ULE0 1092 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 DUSP10Q9Y6W6 482 aa3.35□□□□□ -1.87
RNU6-239P-201ENST00000390990 GIPC1O14908 333 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 MPOP05164 745 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 IGFBP6P24592 240 aaPredicted RBP3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 RTP1P59025 263 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 RPS26P62854 115 aaKnown RBP3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 PDE4BQ07343 736 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 CLEC16AQ2KHT3 1053 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 NT5DC1Q5TFE4 455 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 OLFML2BQ68BL8 750 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 FAM13CQ8NE31 585 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 FBF1Q8TES7 1133 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 KREMEN1Q96MU8 473 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 KRTAP3-1Q9BYR8 98 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 C12orf49Q9H741 205 aa3.34□□□□□ -1.87
RNU6-239P-201ENST00000390990 NUDT19A8MXV4 375 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 HMGA2P52926 109 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 CAP1Q01518 475 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 RAB3GAP1Q15042 981 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 VWA3BQ502W6 1294 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 AGMOQ6ZNB7 445 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 LSRQ86X29 649 aaPredicted RBP3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 RETREG2Q8NC44 543 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 SPATA25Q9BR10 227 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 MENTQ9BUN1 341 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 HDAC8Q9BY41 377 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 SMPD4Q9NXE4 827 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 FAM8A1Q9UBU6 413 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 DCTN4Q9UJW0 460 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 TTF2Q9UNY4 1162 aaKnown RBP3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 IRS2Q9Y4H2 1338 aa3.33□□□□□ -1.88
RNU6-239P-201ENST00000390990 FADS2P1A8MWK0 482 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 C1QTNF3-AMACRE9PGA6 284 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 FKTNO75072 461 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 SLPIP03973 132 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 PLA2G1BP04054 148 aaKnown RBP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 ITGB3P05106 788 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 PLCG1P19174 1290 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 LMNB1P20700 586 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 MAPK8P45983 427 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 TNNI2P48788 182 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 NMIQ13287 307 aaPredicted RBP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 CBX2Q14781 532 aaPredicted RBP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 MAP3K11Q16584 847 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 TSNAXIP1Q2TAA8 658 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 BBS9Q3SYG4 887 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 HSF5Q4G112 596 aaPredicted RBP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 LIPIQ6XZB0 460 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 ENOX1Q8TC92 643 aaKnown RBP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 SYTL5Q8TDW5 730 aaPredicted RBP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 DDX1Q92499 740 aaKnown RBP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 JARID2Q92833 1246 aaPredicted RBP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 TCTN2Q96GX1 697 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 RBM15Q96T37 977 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 ASPNQ9BXN1 380 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 USP40Q9NVE5 1235 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 SUSD2Q9UGT4 822 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 TCFL5Q9UL49 500 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 USTQ9Y2C2 406 aa3.32□□□□□ -1.88
RNU6-239P-201ENST00000390990 SOWAHDA6NJG2 315 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 CHURC1-FNTBB4DL54 471 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 TFE3P19532 575 aaPredicted RBP3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 CNR2P34972 360 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 CEBPAP49715 358 aaPredicted RBP3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 LIG3P49916 1009 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 YARSP54577 528 aaKnown RBP3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 RPL6Q02878 288 aaKnown RBP3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 CCDC85BQ15834 202 aaPredicted RBP3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 TMEM201Q5SNT2 666 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 CPZQ66K79 652 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 GALNT18Q6P9A2 607 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 RPTNQ6XPR3 784 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms