RNA–Protein interactions for RNA: ENST00000390619.2

IGHV4-39-201, Transcript of immunoglobulin heavy variable 4-39, humanhuman

APPRIS P1 BASIC

Gene IGHV4-39, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-39-201ENST00000390619 ME3Q16798 604 aa16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 RTN1Q16799 776 aa16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 SPICE1Q8N0Z3 855 aa16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 CCDC102AQ96A19 550 aa16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 SH2B1Q9NRF2 756 aaPredicted RBP16.63■□□□□ 0.25
IGHV4-39-201ENST00000390619 PFKFB2O60825 505 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 BMP3P12645 472 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 KIF5BP33176 963 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 ZNF543Q08ER8 600 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 MOGSQ13724 837 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 FAM83BQ5T0W9 1011 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 GTF3C6Q969F1 213 aa16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 FRMPD2Q68DX3 1309 aaPredicted RBP16.62■□□□□ 0.25
IGHV4-39-201ENST00000390619 PALM3A6NDB9 673 aaPredicted RBP16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 CETPP11597 493 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 ST3GAL1Q11201 340 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 STK3Q13188 491 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 PPP2R5BQ15173 497 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 DEFB115Q30KQ5 88 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 PAXIP1Q6ZW49 1069 aaPredicted RBP16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 FASTKD5Q7L8L6 764 aaKnown RBP16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 FANCBQ8NB91 859 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 TMX3Q96JJ7 454 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 MS4A4AQ96JQ5 239 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 MGAMO43451 1857 aa16.61■□□□□ 0.25
IGHV4-39-201ENST00000390619 CCL15-CCL14A0A0B4J2E2 113 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 CCT2P78371 535 aaKnown RBP16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 SCRN1Q12765 414 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 CCL15Q16663 113 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 TREML2Q5T2D2 321 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 CYP4F22Q6NT55 531 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 TMTC3Q6ZXV5 915 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 KCTD1Q719H9 257 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 STAG2Q8N3U4 1231 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 BRI3BPQ8WY22 251 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 RPAP3Q9H6T3 665 aaPredicted RBP16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 NCOA5Q9HCD5 579 aaKnown RBP16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 FAM217BQ9NTX9 383 aaPredicted RBP16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 ISY1Q9ULR0 285 aaKnown RBP16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 AGTPBP1Q9UPW5 1226 aa16.6■□□□□ 0.25
IGHV4-39-201ENST00000390619 CCDC196A0A1B0GTZ2 297 aa16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 CDC27P30260 824 aa16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 ANP32AP39687 249 aaKnown RBP16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 GNAQP50148 359 aa16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 C1QTNF8P60827 252 aa16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 CAPNS2Q96L46 248 aa16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 TANGO6Q9C0B7 1094 aa16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 GPCPD1Q9NPB8 672 aa16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 RBM19Q9Y4C8 960 aaKnown RBP16.59■□□□□ 0.25
IGHV4-39-201ENST00000390619 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 TMEM232C9JQI7 657 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 KLRF2D3W0D1 207 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 PLA2G6O60733 806 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 HSPA6P17066 643 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 STAT2P52630 851 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 NOGQ13253 232 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 TTBK2Q6IQ55 1244 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 BTNL9Q6UXG8 535 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 FAM160B2Q86V87 743 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 CCDC83Q8IWF9 413 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 LZTS2Q9BRK4 669 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 FEM1BQ9UK73 627 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 PLXNB2O15031 1838 aa16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 ZNFX1Q9P2E3 1918 aaKnown RBP16.58■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L15C9J2P7 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L13C9JLJ4 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L11C9JVI0 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L18D6R9N7 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L22D6RA61 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L17D6RBQ6 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L19D6RCP7 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L20D6RJB6 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 USP17L24Q0WX57 530 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 GRM1Q13255 1194 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 PABPC4Q13310 644 aaKnown RBP eCLIP16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 BECN1Q14457 450 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 CATSPERGQ6ZRH7 1159 aa16.57■□□□□ 0.24
IGHV4-39-201ENST00000390619 ANKRD23Q86SG2 305 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms