RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 C6orf222P0C671 652 aaPredicted RBP2.54□□□□□ -2
TRAJ41-201ENST00000390496 ITIH2P19823 946 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 CD247P20963 164 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 HSD3B2P26439 372 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 CCNFP41002 786 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 CHMP4BP1P59074 171 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 HNRNPUQ00839 825 aaKnown RBP eCLIP2.54□□□□□ -2
TRAJ41-201ENST00000390496 INSM1Q01101 510 aaPredicted RBP2.54□□□□□ -2
TRAJ41-201ENST00000390496 TNK2Q07912 1038 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 NTRK3Q16288 839 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 DPY19L1Q2PZI1 675 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 NBPF9Q3BBW0 867 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 PLA2G4EQ3MJ16 856 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 PLEKHG4Q58EX7 1191 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 DENND5AQ6IQ26 1287 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 KIAA0907Q7Z7F0 614 aaPredicted RBP2.54□□□□□ -2
TRAJ41-201ENST00000390496 ZAR1Q86SH2 424 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 TRIM59Q8IWR1 403 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 FIBCD1Q8N539 461 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 MFSD2AQ8NA29 543 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 LRRN4CLQ8ND94 238 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 KISS1RQ969F8 398 aaPredicted RBP2.54□□□□□ -2
TRAJ41-201ENST00000390496 C1orf159Q96HA4 380 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 TBC1D32Q96NH3 1257 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 CLUHP3Q96NS8 147 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 NACC1Q96RE7 527 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 ASPNQ9BXN1 380 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.54□□□□□ -2
TRAJ41-201ENST00000390496 TPX2Q9ULW0 747 aaKnown RBP2.54□□□□□ -2
TRAJ41-201ENST00000390496 SUGT1Q9Y2Z0 365 aa2.54□□□□□ -2
TRAJ41-201ENST00000390496 ASXL2Q76L83 1435 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 FAM83GA6ND36 823 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 STXBP3O00186 592 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 ARNTLO00327 626 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 DHX15O43143 795 aaKnown RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 PRODHO43272 600 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 DLX3O60479 287 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 KCNH1O95259 989 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 RAPGEF3O95398 923 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 PROCP04070 461 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 IFNGR1P15260 489 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 SDSP20132 328 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 POU3F3P20264 500 aaPredicted RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 ETV3P41162 512 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 GYS2P54840 703 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 RASSF7Q02833 373 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 NMIQ13287 307 aaPredicted RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 DOC2BQ14184 412 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 MAP7Q14244 749 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 DALRD3Q5D0E6 543 aaKnown RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 TMEM67Q5HYA8 995 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 GTF2IRD2BQ6EKJ0 949 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 PAOXQ6QHF9 649 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 ZPBP2Q6X784 338 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 PRR23CQ6ZRP0 262 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 FGD2Q7Z6J4 655 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 FILIP1Q7Z7B0 1213 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 GTF2IRD2Q86UP8 949 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 HOMER1Q86YM7 354 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 DHX37Q8IY37 1157 aaKnown RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 PLD6Q8N2A8 252 aaKnown RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 ZBTB38Q8NAP3 1195 aaPredicted RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 TMEM145Q8NBT3 493 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 APPBP2Q92624 585 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 SMARCC1Q92922 1105 aaPredicted RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 PUS7Q96PZ0 661 aaKnown RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 FAM83CQ9BQN1 747 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 AARSD1Q9BTE6 412 aaKnown RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 IER2Q9BTL4 223 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 HDAC8Q9BY41 377 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 NCOA5Q9HCD5 579 aaKnown RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 PRDM5Q9NQX1 630 aaPredicted RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 WHRNQ9P202 907 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 TMEFF2Q9UIK5 374 aaPredicted RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 FBXL21Q9UKT6 434 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 PLAGL2Q9UPG8 496 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 GPR55Q9Y2T6 319 aaPredicted RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 RAXQ9Y2V3 346 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 EMC9Q9Y3B6 208 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 MRPS23Q9Y3D9 190 aaKnown RBP2.53□□□□□ -2
TRAJ41-201ENST00000390496 PCDHB12Q9Y5F1 795 aa2.53□□□□□ -2
TRAJ41-201ENST00000390496 TRBV23-1A0A0A0MS06 115 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 TRAV20A0A0B4J274 112 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 H3BS24 57 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 SIGLEC6O43699 453 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 FKTNO75072 461 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 DNAJC8O75937 253 aaPredicted RBP2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 CD3EP07766 207 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 ZNF865P0CJ78 1059 aaPredicted RBP2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 PABPC1P11940 636 aaKnown RBP2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 ITGA4P13612 1032 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 HOXA10P31260 410 aaPredicted RBP2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 CD96P40200 585 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 CEBPAP49715 358 aaPredicted RBP2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 ZNF143P52747 638 aaPredicted RBP2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 OXCT1P55809 520 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 GFRA1P56159 465 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 RNF4P78317 190 aa2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 PABPC4Q13310 644 aaKnown RBP eCLIP2.52□□□□□ -2.01
TRAJ41-201ENST00000390496 ZNF460Q14592 562 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms