RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 G3BP1Q13283 466 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRBV28-201ENST00000390400 HSP90AB4PQ58FF6 505 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 GNASQ5JWF2 1037 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 PRICKLE2Q7Z3G6 844 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 FAM184AQ8NB25 1140 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 ZIC5Q96T25 663 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 SIL1Q9H173 461 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 POLMQ9NP87 494 aaPredicted RBP8.87□□□□□ -0.99
TRBV28-201ENST00000390400 PA2G4Q9UQ80 394 aaKnown RBP8.87□□□□□ -0.99
TRBV28-201ENST00000390400 KCNMB2Q9Y691 235 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.87□□□□□ -0.99
TRBV28-201ENST00000390400 CACNA1SQ13698 1873 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 KIAA1551Q9HCM1 1747 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 A0A0G2JLW4 131 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 EYA2O00167 538 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 BBOX1O75936 387 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 CIAO1O76071 339 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 MBD3O95983 291 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 IGHDP01880 384 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 RHOQP17081 205 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 GNA15P30679 374 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 ALDH1B1P30837 517 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 SLC20A2Q08357 652 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 SYCP1Q15431 976 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 ALG1LQ6GMV1 187 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 LDHAL6AQ6ZMR3 332 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 ERC1Q8IUD2 1116 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 PDCL2Q8N4E4 241 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 RNF217Q8TC41 542 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 CELF1Q92879 486 aaKnown RBP8.86□□□□□ -0.99
TRBV28-201ENST00000390400 GCC1Q96CN9 775 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 OSBPL7Q9BZF2 842 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 DCTPP1Q9H773 170 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 CNNM1Q9NRU3 951 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
TRBV28-201ENST00000390400 ZDHHC3Q9NYG2 299 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 EXOC6BQ9Y2D4 811 aa8.86□□□□□ -0.99
TRBV28-201ENST00000390400 COL4A1P02462 1669 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 SLX4Q8IY92 1834 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 UQCRHLA0A096LP55 91 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 RAB11FIP3O75154 756 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 TNFRSF21O75509 655 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 TPM3P06753 285 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 UQCRHP07919 91 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 IL15P40933 162 aaPredicted RBP8.85□□□□□ -0.99
TRBV28-201ENST00000390400 ATP2B2Q01814 1243 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 BMP2KLQ5H9B9 411 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 PRPF40BQ6NWY9 871 aaKnown RBP8.85□□□□□ -0.99
TRBV28-201ENST00000390400 TTLL6Q8N841 843 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 MYRIPQ8NFW9 859 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 EPS8L3Q8TE67 593 aaKnown RBP8.85□□□□□ -0.99
TRBV28-201ENST00000390400 SREK1Q8WXA9 508 aaKnown RBP8.85□□□□□ -0.99
TRBV28-201ENST00000390400 TNPO1Q92973 898 aaKnown RBP8.85□□□□□ -0.99
TRBV28-201ENST00000390400 FEZ1Q99689 392 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 TSEN34Q9BSV6 310 aaKnown RBP8.85□□□□□ -0.99
TRBV28-201ENST00000390400 PUS3Q9BZE2 481 aaKnown RBP8.85□□□□□ -0.99
TRBV28-201ENST00000390400 AK5Q9Y6K8 562 aa8.85□□□□□ -0.99
TRBV28-201ENST00000390400 BRCA1P38398 1863 aaKnown RBP8.85□□□□□ -0.99
TRBV28-201ENST00000390400 MROH5Q6ZUA9 1318 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 K7ELQ4 463 aaPredicted RBP8.84□□□□□ -0.99
TRBV28-201ENST00000390400 UVSSAQ2YD98 709 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRBV28-201ENST00000390400 LRRC24Q50LG9 513 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 METTL24Q5JXM2 366 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 ATG9AQ7Z3C6 839 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 DRC1Q96MC2 740 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 TINF2Q9BSI4 451 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 TMX4Q9H1E5 349 aaPredicted RBP8.84□□□□□ -0.99
TRBV28-201ENST00000390400 PLA2G2EQ9NZK7 142 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 TMEM63CQ9P1W3 806 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 PIM2Q9P1W9 311 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 RIPOR2Q9Y4F9 1068 aa8.84□□□□□ -0.99
TRBV28-201ENST00000390400 LRRC37AA6NMS7 1700 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 CAPN5O15484 640 aaPredicted RBP8.83□□□□□ -1
TRBV28-201ENST00000390400 KCNA3P22001 575 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 MSX1P28360 303 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 TNNI2P48788 182 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 CHRNDQ07001 517 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 DALRD3Q5D0E6 543 aaKnown RBP8.83□□□□□ -1
TRBV28-201ENST00000390400 C6orf118Q5T5N4 469 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 IER5Q5VY09 327 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 LRRC69Q6ZNQ3 347 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 BTLAQ7Z6A9 289 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 NLGN2Q8NFZ4 835 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 SYAP1Q96A49 352 aaPredicted RBP8.83□□□□□ -1
TRBV28-201ENST00000390400 KIF1BPQ96EK5 621 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 LRRCC1Q9C099 1032 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 ANKRD2Q9GZV1 360 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 TSPYL1Q9H0U9 437 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 CHRDQ9H2X0 955 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 ACBD3Q9H3P7 528 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 MINPP1Q9UNW1 487 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 ATP6V0A2Q9Y487 856 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 A0A1B0GUL6 1792 aa8.83□□□□□ -1
TRBV28-201ENST00000390400 SASH1O94885 1247 aa8.82□□□□□ -1
TRBV28-201ENST00000390400 POLR3DP05423 398 aaPredicted RBP8.82□□□□□ -1
TRBV28-201ENST00000390400 KCNJ4P48050 445 aa8.82□□□□□ -1
TRBV28-201ENST00000390400 PRR20EP86478 221 aa8.82□□□□□ -1
TRBV28-201ENST00000390400 PRR20CP86479 221 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms