RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SENP1Q9P0U3 644 aa5.4□□□□□ -1.55
PTPRD-203ENST00000381196 A0A1B0GW55 424 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 MYO1CO00159 1063 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 DUX4L2P0CJ85 424 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 DUX4L3P0CJ86 424 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 DUX4L4P0CJ87 422 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 DUX4L5P0CJ88 424 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 DUX4L6P0CJ89 424 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 DUX4L7P0CJ90 424 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 EEF1GP26641 437 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SERPINB4P48594 390 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 INTS8Q75QN2 995 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 TMCO5AQ8N6Q1 288 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 UBL4BQ8N7F7 174 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 GPATCH11Q8N954 259 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 GRK7Q8WTQ7 553 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 THUMPD2Q9BTF0 503 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 DUX4Q9UBX2 424 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 MAPK8IP2Q13387 824 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 CUL4AQ13619 759 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 KRT39Q6A163 491 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 PASD1Q8IV76 773 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 C1orf131Q8NDD1 294 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 ERMNQ8TAM6 284 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 LARP6Q9BRS8 491 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 VPS18Q9P253 973 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 hCG_1984214I3L0E3 225 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 VIMP08670 466 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 MSANTD4Q8NCY6 345 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 PHACTR1Q9C0D0 580 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SYNCQ9H7C4 482 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 TMOD4Q9NZQ9 345 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 COMMD10Q9Y6G5 202 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 ESRRBO95718 433 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 PNMA2Q9UL42 364 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 PCDH11XQ9BZA7 1347 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 PCDH11YQ9BZA8 1340 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 NALCNQ8IZF0 1738 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 CPP00450 1065 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 HARSP12081 509 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 KCTD17Q8N5Z5 321 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SIKE1Q9BRV8 207 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 GPHNQ9NQX3 736 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 CEP170BQ9Y4F5 1589 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 KIF1AQ12756 1690 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 H0YIN7 160 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 LSM1O15116 133 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SUN1O94901 812 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 KRT5P13647 590 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SYKP43405 635 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 TRAPPC10P48553 1259 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 TSC22D1Q15714 1073 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 CRELD2Q6UXH1 353 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 IQCGQ9H095 443 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 C1orf115Q9H7X2 142 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 CHCHD3Q9NX63 227 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 TRPC5Q9UL62 973 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 BCS1LQ9Y276 419 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 CPS1P31327 1500 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SRGAP1Q7Z6B7 1085 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 ARHGEF25Q86VW2 580 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 KIFC3Q9BVG8 833 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 BCAR3O75815 825 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SIRT1Q96EB6 747 aa5.39□□□□□ -1.55
PTPRD-203ENST00000381196 DDX27Q96GQ7 796 aaKnown RBP5.39□□□□□ -1.55
PTPRD-203ENST00000381196 SLIT1O75093 1534 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 POTEB3A0JP26 581 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 UQCRFS1P1P0C7P4 283 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 FAM98CQ17RN3 349 aaKnown RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 OTUD7BQ6GQQ9 843 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 PRPF40BQ6NWY9 871 aaKnown RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 POTEBQ6S5H4 581 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 LDHAL6AQ6ZMR3 332 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 CATIPQ7Z7H3 387 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 USP48Q86UV5 1035 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 FSIP1Q8NA03 581 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 TBC1D5Q92609 795 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 HVCN1Q96D96 273 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 KIF2CQ99661 725 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 ABCF3Q9NUQ8 709 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 SCHIP1Q9P0W5 487 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 CDC23Q9UJX2 597 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 ACEP12821 1306 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 RSPH10B2B2RC85 870 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 SMAPO00193 183 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 CLASP2O75122 1294 aaKnown RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 RSPH10BP0C881 870 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 HCLS1P14317 486 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 NLRP12P59046 1061 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 MORC4Q8TE76 937 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 SSH1Q8WYL5 1049 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 POLR3EQ9NVU0 708 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 UTP11Q9Y3A2 253 aaKnown RBP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPRD-203ENST00000381196 EMILIN1Q9Y6C2 1016 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 DIP2CQ9Y2E4 1556 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 DCTN3O75935 186 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 TEDDM1Q5T9Z0 273 aa5.38□□□□□ -1.55
PTPRD-203ENST00000381196 C20orf194Q5TEA3 1177 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms