RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 TXNRD2Q9NNW7 524 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 HOXC10Q9NYD6 342 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 MORF4L1Q9UBU8 362 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 ADAMTS5Q9UNA0 930 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 MYPNQ86TC9 1320 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 MCCP23508 829 aa23.46■■□□□ 1.35
CDPF1-202ENST00000381037 DSG3P32926 999 aa23.46■■□□□ 1.35
CDPF1-202ENST00000381037 KRT32Q14532 448 aa23.46■■□□□ 1.35
CDPF1-202ENST00000381037 FAM110CQ1W6H9 321 aa23.46■■□□□ 1.35
CDPF1-202ENST00000381037 PEX10O60683 326 aa23.45■■□□□ 1.34
CDPF1-202ENST00000381037 FLOT1O75955 427 aa23.45■■□□□ 1.34
CDPF1-202ENST00000381037 BMP3P12645 472 aa23.45■■□□□ 1.34
CDPF1-202ENST00000381037 MCM5P33992 734 aa23.45■■□□□ 1.34
CDPF1-202ENST00000381037 ANKRD13CQ8N6S4 541 aa23.45■■□□□ 1.34
CDPF1-202ENST00000381037 SENP2Q9HC62 589 aa23.45■■□□□ 1.34
CDPF1-202ENST00000381037 CASP8AP2Q9UKL3 1982 aa23.45■■□□□ 1.34
CDPF1-202ENST00000381037 IFIT3O14879 490 aaKnown RBP23.44■■□□□ 1.34
CDPF1-202ENST00000381037 CNMDO75829 334 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 EXOSC10Q01780 885 aaKnown RBP23.44■■□□□ 1.34
CDPF1-202ENST00000381037 PNMA1Q8ND90 353 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 GTF3C2Q8WUA4 911 aaPredicted RBP23.44■■□□□ 1.34
CDPF1-202ENST00000381037 PARP14Q460N5 1801 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 PRC1O43663 620 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 PDHBP11177 359 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 CTGFP29279 349 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 SLC1A4P43007 532 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 LACTBP83111 547 aaPredicted RBP23.44■■□□□ 1.34
CDPF1-202ENST00000381037 DCAF4Q8WV16 495 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 PPP1R9AQ9ULJ8 1098 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 RABGAP1Q9Y3P9 1069 aa23.44■■□□□ 1.34
CDPF1-202ENST00000381037 PLA2G6O60733 806 aa23.43■■□□□ 1.34
CDPF1-202ENST00000381037 Q3C1V9 767 aa23.43■■□□□ 1.34
CDPF1-202ENST00000381037 IFIT1BQ5T764 474 aaKnown RBP23.43■■□□□ 1.34
CDPF1-202ENST00000381037 ATG4CQ96DT6 458 aa23.43■■□□□ 1.34
CDPF1-202ENST00000381037 KAT14Q9H8E8 782 aa23.43■■□□□ 1.34
CDPF1-202ENST00000381037 GPHNQ9NQX3 736 aaPredicted RBP23.43■■□□□ 1.34
CDPF1-202ENST00000381037 BTBD7Q9P203 1132 aa23.43■■□□□ 1.34
CDPF1-202ENST00000381037 EIF5BO60841 1220 aaKnown RBP23.42■■□□□ 1.34
CDPF1-202ENST00000381037 KCTD1Q719H9 257 aa23.42■■□□□ 1.34
CDPF1-202ENST00000381037 DHX32Q7L7V1 743 aaKnown RBP23.42■■□□□ 1.34
CDPF1-202ENST00000381037 CD99L2Q8TCZ2 262 aa23.42■■□□□ 1.34
CDPF1-202ENST00000381037 TMEM87BQ96K49 555 aa23.42■■□□□ 1.34
CDPF1-202ENST00000381037 SLF1Q9BQI6 1058 aa23.42■■□□□ 1.34
CDPF1-202ENST00000381037 LY9Q9HBG7 655 aa23.42■■□□□ 1.34
CDPF1-202ENST00000381037 FEM1BQ9UK73 627 aa23.42■■□□□ 1.34
CDPF1-202ENST00000381037 WDR19Q8NEZ3 1342 aa23.42■■□□□ 1.34
CDPF1-202ENST00000381037 TMEM232C9JQI7 657 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 SART3Q15020 963 aaKnown RBP23.41■■□□□ 1.34
CDPF1-202ENST00000381037 TMEM67Q5HYA8 995 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 PRPF38AQ8NAV1 312 aaKnown RBP23.41■■□□□ 1.34
CDPF1-202ENST00000381037 CHMP4CQ96CF2 233 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 ERO1AQ96HE7 468 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 ARHGAP39Q9C0H5 1083 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 A0A0G2JMZ2 1700 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 SH2B2O14492 632 aaPredicted RBP23.41■■□□□ 1.34
CDPF1-202ENST00000381037 ERVK-9P63128 1117 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 ERVK-24P63145 666 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 ZNF543Q08ER8 600 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 WTAPQ15007 396 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 BTNL9Q6UXG8 535 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 MB21D1Q8N884 522 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 REPS2Q8NFH8 660 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 GPRC5AQ8NFJ5 357 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 MTMR7Q9Y216 660 aa23.41■■□□□ 1.34
CDPF1-202ENST00000381037 HTTP42858 3142 aa23.4■■□□□ 1.34
CDPF1-202ENST00000381037 ERICH2A1L162 156 aa23.4■■□□□ 1.34
CDPF1-202ENST00000381037 VWA5AO00534 786 aa23.4■■□□□ 1.34
CDPF1-202ENST00000381037 HMGB1P09429 215 aaKnown RBP23.4■■□□□ 1.34
CDPF1-202ENST00000381037 LIFRP42702 1097 aa23.4■■□□□ 1.34
CDPF1-202ENST00000381037 JAKMIP1Q96N16 626 aaKnown RBP23.4■■□□□ 1.34
CDPF1-202ENST00000381037 PAGR1Q9BTK6 254 aa23.4■■□□□ 1.34
CDPF1-202ENST00000381037 STAT2P52630 851 aa23.39■■□□□ 1.33
CDPF1-202ENST00000381037 TROAPQ12815 778 aa23.39■■□□□ 1.33
CDPF1-202ENST00000381037 TTBK2Q6IQ55 1244 aa23.39■■□□□ 1.33
CDPF1-202ENST00000381037 IL17RAQ96F46 866 aa23.39■■□□□ 1.33
CDPF1-202ENST00000381037 TRIM47Q96LD4 638 aa23.39■■□□□ 1.33
CDPF1-202ENST00000381037 CPA1P15085 419 aa23.38■■□□□ 1.33
CDPF1-202ENST00000381037 TMEM132BQ14DG7 1078 aa23.38■■□□□ 1.33
CDPF1-202ENST00000381037 FAM160B2Q86V87 743 aa23.38■■□□□ 1.33
CDPF1-202ENST00000381037 CHURC1Q8WUH1 139 aa23.38■■□□□ 1.33
CDPF1-202ENST00000381037 LRRC2Q9BYS8 371 aa23.38■■□□□ 1.33
CDPF1-202ENST00000381037 ZNF214Q9UL59 606 aaPredicted RBP23.38■■□□□ 1.33
CDPF1-202ENST00000381037 PSMC4P43686 418 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 GPATCH4Q5T3I0 446 aaKnown RBP23.37■■□□□ 1.33
CDPF1-202ENST00000381037 COL13A1Q5TAT6 717 aaPredicted RBP23.37■■□□□ 1.33
CDPF1-202ENST00000381037 SGMS1Q86VZ5 419 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 TMTC2Q8N394 836 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 KIFC2Q96AC6 838 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 TCEANC2Q96MN5 208 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 TM6SF1Q9BZW5 370 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 PORCNQ9H237 461 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 SLC38A10Q9HBR0 1119 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 ZSWIM6Q9HCJ5 1215 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 ZSWIM8A7E2V4 1837 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 FRMPD2Q68DX3 1309 aaPredicted RBP23.37■■□□□ 1.33
CDPF1-202ENST00000381037 ANAPC15P60006 121 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 CCDC96Q2M329 555 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 OTOP1Q7RTM1 612 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 GPCPD1Q9NPB8 672 aa23.37■■□□□ 1.33
CDPF1-202ENST00000381037 PRR12Q9ULL5 1215 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms