RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 CCT6AP40227 531 aaKnown RBP13.78□□□□□ -0.2
RFC3-201ENST00000380071 TFAP4Q01664 338 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 SBK1Q52WX2 424 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 PPFIBP1Q86W92 1011 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 C4orf32Q8N8J7 132 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 SETDB2Q96T68 719 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 LZTFL1Q9NQ48 299 aa13.78□□□□□ -0.2
RFC3-201ENST00000380071 ARPP21Q9UBL0 812 aaPredicted RBP13.78□□□□□ -0.2
RFC3-201ENST00000380071 GABPB1Q06547 395 aaPredicted RBP13.77□□□□□ -0.21
RFC3-201ENST00000380071 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
RFC3-201ENST00000380071 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
RFC3-201ENST00000380071 NBPF5PQ86XG9 351 aaPredicted RBP13.77□□□□□ -0.21
RFC3-201ENST00000380071 CREBRFQ8IUR6 639 aa13.77□□□□□ -0.21
RFC3-201ENST00000380071 MAPK8IP1Q9UQF2 711 aa13.77□□□□□ -0.21
RFC3-201ENST00000380071 MRFAP1Q9Y605 127 aa13.77□□□□□ -0.21
RFC3-201ENST00000380071 ADGRG1Q9Y653 693 aa13.77□□□□□ -0.21
RFC3-201ENST00000380071 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.21
RFC3-201ENST00000380071 FXR1P51114 621 aaKnown RBP eCLIP13.76□□□□□ -0.21
RFC3-201ENST00000380071 BMS1Q14692 1282 aaKnown RBP13.76□□□□□ -0.21
RFC3-201ENST00000380071 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 RNF225M0QZC1 329 aaPredicted RBP13.76□□□□□ -0.21
RFC3-201ENST00000380071 GYPCP04921 128 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 CCDC175P0C221 793 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 TM4SF1P30408 202 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 TRAPPC10P48553 1259 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 KRT31Q15323 416 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 BLIDQ8IZY5 108 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 ANKRD2Q9GZV1 360 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 VPS16Q9H269 839 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 KAT14Q9H8E8 782 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
RFC3-201ENST00000380071 USP17L3A6NCW0 530 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 USP17L4A6NCW7 530 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 GTPBP6O43824 516 aaPredicted RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 MFAP3LO75121 409 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 SEC31AO94979 1220 aaKnown RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 ZRANB2O95218 330 aaKnown RBP eCLIP13.75□□□□□ -0.212e-7■■■□□ 18.7
RFC3-201ENST00000380071 PPP2R3AQ06190 1150 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 ZNF771Q7L3S4 317 aaPredicted RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 USP17L1Q7RTZ2 530 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 AMIGO3Q86WK7 504 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 DZIP1Q86YF9 867 aaKnown RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 CCDC12Q8WUD4 166 aaPredicted RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 GDAQ9Y2T3 454 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 PDS5AQ29RF7 1337 aaKnown RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 PNMA6AP0CW24 399 aaPredicted RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 KIF5BP33176 963 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 TERF2Q15554 542 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 GRIK5Q16478 980 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 SLC35G1Q2M3R5 365 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 SH3RF3Q8TEJ3 882 aaPredicted RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 NYXQ9GZU5 481 aa13.75□□□□□ -0.21
RFC3-201ENST00000380071 MKRN1Q9UHC7 482 aaKnown RBP13.75□□□□□ -0.21
RFC3-201ENST00000380071 LRRC10BA6NIK2 292 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 PP2D1A8MPX8 630 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 N4BP3O15049 544 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 ABL1P00519 1130 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 RPN1P04843 607 aaKnown RBP13.74□□□□□ -0.21
RFC3-201ENST00000380071 USP5P45974 858 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 NELFBQ8WX92 580 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 TAB2Q9NYJ8 693 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 LIMA1Q9UHB6 759 aaKnown RBP13.74□□□□□ -0.21
RFC3-201ENST00000380071 RWDD2AQ9UIY3 292 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 PCDHA4Q9UN74 947 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 KIAA1551Q9HCM1 1747 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 CNTNAP4Q9C0A0 1308 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 IRS2Q9Y4H2 1338 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 PRCPP42785 496 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 PLA2G4AP47712 749 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 PAK1Q13153 545 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 TEX35Q5T0J7 233 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 ZNF658Q5TYW1 1059 aaPredicted RBP13.74□□□□□ -0.21
RFC3-201ENST00000380071 TMCO3Q6UWJ1 677 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 TPTE2Q6XPS3 522 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 SLC44A5Q8NCS7 719 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 NAA15Q9BXJ9 866 aaKnown RBP13.74□□□□□ -0.21
RFC3-201ENST00000380071 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 LAMB1P07942 1786 aa13.74□□□□□ -0.21
RFC3-201ENST00000380071 CYTH3O43739 400 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 ZPR1O75312 459 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 LONP1P36776 959 aaKnown RBP13.73□□□□□ -0.21
RFC3-201ENST00000380071 DIXDC1Q155Q3 683 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 ARL6IP4Q66PJ3 421 aaKnown RBP13.73□□□□□ -0.21
RFC3-201ENST00000380071 RSRC2Q7L4I2 434 aaKnown RBP13.73□□□□□ -0.21
RFC3-201ENST00000380071 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 PLIN2Q99541 437 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 MKNK2Q9HBH9 465 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 ARGLU1Q9NWB6 273 aaPredicted RBP13.73□□□□□ -0.21
RFC3-201ENST00000380071 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 M0R2N6 131 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 GNPATO15228 680 aa13.73□□□□□ -0.21
RFC3-201ENST00000380071 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms