RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 TMTC2Q8N394 836 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 ENAHQ8N8S7 591 aaPredicted RBP13.99□□□□□ -0.17
PCNA-201ENST00000379143 NKX2-3Q8TAU0 364 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 SMCR8Q8TEV9 937 aaPredicted RBP13.99□□□□□ -0.17
PCNA-201ENST00000379143 GMCL1Q96IK5 515 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 TMEM87BQ96K49 555 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 RPAP3Q9H6T3 665 aaPredicted RBP13.99□□□□□ -0.17
PCNA-201ENST00000379143 WDR19Q8NEZ3 1342 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 PRC1O43663 620 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 TBC1D8O95759 1140 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 GCLCP48506 637 aaPredicted RBP13.98□□□□□ -0.17
PCNA-201ENST00000379143 ANAPC15P60006 121 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 COG2Q14746 738 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 WTAPQ15007 396 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 SEC23AQ15436 765 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 DHX32Q7L7V1 743 aaKnown RBP13.98□□□□□ -0.17
PCNA-201ENST00000379143 TANGO6Q9C0B7 1094 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
PCNA-201ENST00000379143 HOXC10Q9NYD6 342 aa13.98□□□□□ -0.17
PCNA-201ENST00000379143 MYPNQ86TC9 1320 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 CYP2C8P10632 490 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 BMP3P12645 472 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 SLC1A4P43007 532 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 ANTXR2P58335 489 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 ADCK5Q3MIX3 580 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 TMEM67Q5HYA8 995 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 KIAA1755Q5JYT7 1200 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 BLOC1S2Q6QNY1 142 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 PNMA1Q8ND90 353 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 DCAF4Q8WV16 495 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 TM6SF1Q9BZW5 370 aa13.97□□□□□ -0.17
PCNA-201ENST00000379143 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
PCNA-201ENST00000379143 SEC24BO95487 1268 aa13.96□□□□□ -0.17
PCNA-201ENST00000379143 LIFRP42702 1097 aa13.96□□□□□ -0.17
PCNA-201ENST00000379143 HERVK_113P62684 666 aa13.96□□□□□ -0.17
PCNA-201ENST00000379143 FAM83BQ5T0W9 1011 aa13.96□□□□□ -0.17
PCNA-201ENST00000379143 LBX2Q6XYB7 198 aa13.96□□□□□ -0.17
PCNA-201ENST00000379143 CHST3Q7LGC8 479 aa13.96□□□□□ -0.17
PCNA-201ENST00000379143 IGDCC4Q8TDY8 1250 aa13.96□□□□□ -0.17
PCNA-201ENST00000379143 JAKMIP1Q96N16 626 aaKnown RBP13.96□□□□□ -0.17
PCNA-201ENST00000379143 P2RX7Q99572 595 aaKnown RBP13.96□□□□□ -0.17
PCNA-201ENST00000379143 FEM1BQ9UK73 627 aa13.96□□□□□ -0.17
PCNA-201ENST00000379143 ADGRA2Q96PE1 1338 aa13.95□□□□□ -0.18
PCNA-201ENST00000379143 GPR25O00155 361 aa13.95□□□□□ -0.18
PCNA-201ENST00000379143 PLA2G6O60733 806 aa13.95□□□□□ -0.18
PCNA-201ENST00000379143 FLOT1O75955 427 aa13.95□□□□□ -0.18
PCNA-201ENST00000379143 STAT2P52630 851 aa13.95□□□□□ -0.18
PCNA-201ENST00000379143 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
PCNA-201ENST00000379143 GPATCH4Q5T3I0 446 aaKnown RBP13.95□□□□□ -0.18
PCNA-201ENST00000379143 C17orf99Q6UX52 265 aa13.95□□□□□ -0.18
PCNA-201ENST00000379143 FAM160B2Q86V87 743 aa13.95□□□□□ -0.18
PCNA-201ENST00000379143 PRPF38AQ8NAV1 312 aaKnown RBP13.95□□□□□ -0.18
PCNA-201ENST00000379143 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
PCNA-201ENST00000379143 SH2B2O14492 632 aaPredicted RBP13.94□□□□□ -0.18
PCNA-201ENST00000379143 SNHG28P0DPA3 235 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 FDX1P10109 184 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 PDHBP11177 359 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 CASTP20810 708 aaKnown RBP13.94□□□□□ -0.18
PCNA-201ENST00000379143 FGD1P98174 961 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 FAM110CQ1W6H9 321 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 RUFY3Q7L099 469 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 CATIPQ7Z7H3 387 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 MB21D1Q8N884 522 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 NUP88Q99567 741 aaPredicted RBP13.94□□□□□ -0.18
PCNA-201ENST00000379143 SLF1Q9BQI6 1058 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 LY9Q9HBG7 655 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 PPP1R9AQ9ULJ8 1098 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
PCNA-201ENST00000379143 CYP46A1Q9Y6A2 500 aa13.94□□□□□ -0.18
PCNA-201ENST00000379143 CCDC69A6NI79 296 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
PCNA-201ENST00000379143 TMEM232C9JQI7 657 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 BCRP11274 1271 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 RPS6KB1P23443 525 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 SP3Q02447 781 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
PCNA-201ENST00000379143 ARHGEF6Q15052 776 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 NFXL1Q6ZNB6 911 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 SGMS1Q86VZ5 419 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 FBXL16Q8N461 479 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 IL17RAQ96F46 866 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 MAP3K14Q99558 947 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 R3HDMLQ9H3Y0 253 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 MORF4L1Q9UBU8 362 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 CPA4Q9UI42 421 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 RABGAP1Q9Y3P9 1069 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 PARP14Q460N5 1801 aa13.93□□□□□ -0.18
PCNA-201ENST00000379143 FKTNO75072 461 aa13.92□□□□□ -0.18
PCNA-201ENST00000379143 CALM1P0DP23 149 aa13.92□□□□□ -0.18
PCNA-201ENST00000379143 CALM2P0DP24 149 aa13.92□□□□□ -0.18
PCNA-201ENST00000379143 CALM3P0DP25 149 aa13.92□□□□□ -0.18
PCNA-201ENST00000379143 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
PCNA-201ENST00000379143 KIF22Q14807 665 aa13.92□□□□□ -0.18
PCNA-201ENST00000379143 SYNE3Q6ZMZ3 975 aa13.92□□□□□ -0.18
PCNA-201ENST00000379143 KCTD1Q719H9 257 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms