RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 COPRSQ9NQ92 184 aa8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 DHX16O60231 1041 aaKnown RBP8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 RHOXF2BP0C7M4 288 aa8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 LONRF2Q1L5Z9 754 aa8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 PAXIP1Q6ZW49 1069 aaPredicted RBP8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 ZSCAN31Q96LW9 406 aaPredicted RBP8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 RHOXF2Q9BQY4 288 aa8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 TOMM22Q9NS69 142 aa8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 ARAP2Q8WZ64 1704 aa8.42□□□□□ -1.06
GPCPD1-201ENST00000379019 PDS5AQ29RF7 1337 aaKnown RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 APBA1Q02410 837 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 MRPS27Q92552 414 aaKnown RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 PITPNM2Q9BZ72 1349 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 CYP2D7A0A087X1C5 515 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 LOC102724159A0A0B4J2E5 919 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 A0A1B0GUL7 405 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 ZNF263O14978 683 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 PWP2Q15269 919 aaKnown RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 CIAPIN1Q6FI81 312 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 REM2Q8IYK8 340 aaPredicted RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 WWC3Q9ULE0 1092 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 L1RE1Q9UN81 338 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 KLF18A0A0U1RQI7 1052 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 RBL2Q08999 1139 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 PIH1D3Q9NQM4 214 aaKnown RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 PAG1Q9NWQ8 432 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 H3BQV1 296 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 KIF3CO14782 793 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 PPIP5K2O43314 1243 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 PRPF6O94906 941 aaKnown RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 PLEKP08567 350 aaPredicted RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 PBX1P40424 430 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 UBE4AQ14139 1066 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 ZSCAN26Q16670 478 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 CCDC57Q2TAC2 916 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 HELBQ8NG08 1087 aaPredicted RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 SRRTQ9BXP5 876 aaKnown RBP8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 LACRTQ9GZZ8 138 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 MAN1B1Q9UKM7 699 aa8.41□□□□□ -1.06
GPCPD1-201ENST00000379019 B4E1Z4 1266 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 SEMA3EO15041 775 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 ADARB2Q9NS39 739 aaKnown RBP8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 PGAP2Q9UHJ9 254 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 A0A1B0GUL6 1792 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 EPHB6O15197 1021 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 SPTLC2O15270 562 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 SRLQ86TD4 932 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 FAM89AQ96GI7 184 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 HHIPL1Q96JK4 782 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 MPHOSPH8Q99549 860 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 SDF4Q9BRK5 362 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 IKBKBO14920 756 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 SLC35G1Q2M3R5 365 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 ZNF804AQ7Z570 1209 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 IGDCC4Q8TDY8 1250 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 HPS3Q969F9 1004 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 TIGD1Q96MW7 591 aa8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 ZC3H12CQ9C0D7 883 aaKnown RBP8.4□□□□□ -1.06
GPCPD1-201ENST00000379019 TRIM49BA6NDI0 452 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 UBASH3AP57075 661 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 RASSF7Q02833 373 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 HSPA6P17066 643 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 SARSP49591 514 aaKnown RBP8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 AMPD2Q01433 879 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 WASHC4Q2M389 1173 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 WDR59Q6PJI9 974 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 SERTAD1Q9UHV2 236 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 PPP2R3BQ9Y5P8 575 aa8.4□□□□□ -1.07
GPCPD1-201ENST00000379019 EPB41L2O43491 1005 aaKnown RBP8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 MICU3Q86XE3 530 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 IPO4Q8TEX9 1081 aaKnown RBP8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 NMT2O60551 498 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 GNG11P61952 73 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 TBC1D16Q8TBP0 767 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 MRIQ9BWK5 157 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 GOLGA6L4A6NEF3 574 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 PP2D1A8MPX8 630 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 ACTN4O43707 911 aaKnown RBP8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 CUTAO60888 179 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 NLRP12P59046 1061 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 ANO1Q5XXA6 986 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 NAA16Q6N069 864 aaPredicted RBP8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 NFE2L3Q9Y4A8 694 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 REV3LO60673 3130 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 G3V3G9 751 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 ECM2O94769 699 aaPredicted RBP8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 ATP2B1P20020 1258 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 NR1I3Q14994 352 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 DCAF8Q5TAQ9 597 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 ERC1Q8IUD2 1116 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 MMS19Q96T76 1030 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 ZSWIM5Q9P217 1185 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 HDAC9Q9UKV0 1011 aa8.39□□□□□ -1.07
GPCPD1-201ENST00000379019 BECN2A8MW95 431 aa8.38□□□□□ -1.07
GPCPD1-201ENST00000379019 POLR2DO15514 142 aaKnown RBP8.38□□□□□ -1.07
GPCPD1-201ENST00000379019 PRC1O43663 620 aa8.38□□□□□ -1.07
GPCPD1-201ENST00000379019 NBPF9Q3BBW0 867 aa8.38□□□□□ -1.07
GPCPD1-201ENST00000379019 TAF7LQ5H9L4 462 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms