RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RARBP10826 455 aa21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 TMEM132BQ14DG7 1078 aa21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 SNX17Q15036 470 aa21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 PANK1Q8TE04 598 aa21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 LENG1Q96BZ8 264 aaPredicted RBP21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 RNPC3Q96LT9 517 aaKnown RBP21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 TTYH1Q9H313 450 aaPredicted RBP21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 SWAP70Q9UH65 585 aa21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 PARP14Q460N5 1801 aa21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 TCRBV5S4A2TA0A5A2 114 aa21.46■■□□□ 1.03
PDLIM4-202ENST00000379018 IFIT2P09913 472 aaKnown RBP21.46■■□□□ 1.03
PDLIM4-202ENST00000379018 ABRAQ8N0Z2 381 aa21.46■■□□□ 1.03
PDLIM4-202ENST00000379018 CLASRPQ8N2M8 674 aaKnown RBP21.46■■□□□ 1.03
PDLIM4-202ENST00000379018 FBXO28Q9NVF7 368 aa21.46■■□□□ 1.03
PDLIM4-202ENST00000379018 TMX2Q9Y320 296 aa21.46■■□□□ 1.03
PDLIM4-202ENST00000379018 PLXNA1Q9UIW2 1896 aa21.45■■□□□ 1.02
PDLIM4-202ENST00000379018 WDR46O15213 610 aaKnown RBP21.45■■□□□ 1.02
PDLIM4-202ENST00000379018 CLTBP09497 229 aa21.45■■□□□ 1.02
PDLIM4-202ENST00000379018 FOSL2P15408 326 aa21.45■■□□□ 1.02
PDLIM4-202ENST00000379018 TAL1P17542 331 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-202ENST00000379018 ITGB8P26012 769 aa21.45■■□□□ 1.02
PDLIM4-202ENST00000379018 HSP90AB4PQ58FF6 505 aa21.45■■□□□ 1.02
PDLIM4-202ENST00000379018 SIAH1Q8IUQ4 282 aa21.45■■□□□ 1.02
PDLIM4-202ENST00000379018 SLC25A27O95847 323 aa21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 CDK8P49336 464 aa21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 SMAD3P84022 425 aaKnown RBP21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 HNRNPUQ00839 825 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 KCTD2Q14681 263 aa21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 RNF180Q86T96 592 aa21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 AMOTL1Q8IY63 956 aa21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 BOLA2Q9H3K6 86 aa21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 PHF24Q9UPV7 400 aa21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 PRUNE2Q8WUY3 3088 aa21.44■■□□□ 1.02
PDLIM4-202ENST00000379018 EEF2P13639 858 aaKnown RBP21.43■■□□□ 1.02
PDLIM4-202ENST00000379018 RAG1P15918 1043 aa21.43■■□□□ 1.02
PDLIM4-202ENST00000379018 SLC4A3P48751 1232 aa21.43■■□□□ 1.02
PDLIM4-202ENST00000379018 EPHB4P54760 987 aa21.43■■□□□ 1.02
PDLIM4-202ENST00000379018 TINF2Q9BSI4 451 aa21.43■■□□□ 1.02
PDLIM4-202ENST00000379018 TACC3Q9Y6A5 838 aa21.43■■□□□ 1.02
PDLIM4-202ENST00000379018 A0A1W2PQ45 241 aaPredicted RBP21.42■■□□□ 1.02
PDLIM4-202ENST00000379018 A0A1W2PQY0 241 aa21.42■■□□□ 1.02
PDLIM4-202ENST00000379018 CHGBP05060 677 aa21.42■■□□□ 1.02
PDLIM4-202ENST00000379018 FAM83BQ5T0W9 1011 aa21.42■■□□□ 1.02
PDLIM4-202ENST00000379018 STK11IPQ8N1F8 1099 aa21.42■■□□□ 1.02
PDLIM4-202ENST00000379018 KIF1BPQ96EK5 621 aa21.42■■□□□ 1.02
PDLIM4-202ENST00000379018 PAG1Q9NWQ8 432 aa21.42■■□□□ 1.02
PDLIM4-202ENST00000379018 USP17L12C9JPN9 530 aa21.41■■□□□ 1.02
PDLIM4-202ENST00000379018 USP17L21D6R901 530 aa21.41■■□□□ 1.02
PDLIM4-202ENST00000379018 STAT3P40763 770 aa21.41■■□□□ 1.02
PDLIM4-202ENST00000379018 RIOX2Q8IUF8 465 aa21.41■■□□□ 1.02
PDLIM4-202ENST00000379018 DDRGK1Q96HY6 314 aa21.41■■□□□ 1.02
PDLIM4-202ENST00000379018 CCDC17Q96LX7 622 aa21.41■■□□□ 1.02
PDLIM4-202ENST00000379018 GOPCQ9HD26 462 aa21.41■■□□□ 1.02
PDLIM4-202ENST00000379018 TMEM39AQ9NV64 488 aa21.41■■□□□ 1.02
PDLIM4-202ENST00000379018 AKR1A1P14550 325 aa21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 ADD2P35612 726 aa21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 FPGSQ05932 587 aa21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 C1orf53Q5VUE5 145 aa21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 NUP88Q99567 741 aaPredicted RBP21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 ATP8A2Q9NTI2 1148 aa21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 PPP1R9AQ9ULJ8 1098 aa21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 CNPY2Q9Y2B0 182 aa21.4■■□□□ 1.02
PDLIM4-202ENST00000379018 VWA5AO00534 786 aa21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 ZNF792Q3KQV3 632 aa21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 C12orf60Q5U649 245 aa21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 C16orf86Q6ZW13 317 aa21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 STARD7Q9NQZ5 370 aa21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 NRBP1Q9UHY1 535 aa21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 ZHX1Q9UKY1 873 aaPredicted RBP21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 SLC4A4Q9Y6R1 1079 aa21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 VCANP13611 3396 aa21.39■■□□□ 1.01
PDLIM4-202ENST00000379018 MYH7P12883 1935 aa21.38■■□□□ 1.01
PDLIM4-202ENST00000379018 ZNF865P0CJ78 1059 aaPredicted RBP21.38■■□□□ 1.01
PDLIM4-202ENST00000379018 KANSL2Q9H9L4 492 aa21.38■■□□□ 1.01
PDLIM4-202ENST00000379018 KIAA0355O15063 1070 aa21.37■■□□□ 1.01
PDLIM4-202ENST00000379018 ZNF214Q9UL59 606 aaPredicted RBP21.37■■□□□ 1.01
PDLIM4-202ENST00000379018 ADAMTS5Q9UNA0 930 aa21.37■■□□□ 1.01
PDLIM4-202ENST00000379018 CDH23Q9H251 3354 aa21.36■■□□□ 1.01
PDLIM4-202ENST00000379018 SYNRGQ9UMZ2 1314 aa21.36■■□□□ 1.01
PDLIM4-202ENST00000379018 DCDC2CA8MYV0 355 aa21.36■■□□□ 1.01
PDLIM4-202ENST00000379018 HMMRO75330 724 aa21.36■■□□□ 1.01
PDLIM4-202ENST00000379018 SNRNP48Q6IEG0 339 aaKnown RBP21.36■■□□□ 1.01
PDLIM4-202ENST00000379018 VTI1AQ96AJ9 217 aa21.36■■□□□ 1.01
PDLIM4-202ENST00000379018 DDX11Q96FC9 970 aa21.36■■□□□ 1.01
PDLIM4-202ENST00000379018 ADAMTS4O75173 837 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 DNAJB2P25686 324 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 ACLYP53396 1101 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 FAAP100Q0VG06 881 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 GRIN2CQ14957 1233 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 CTR9Q6PD62 1173 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 CPXCR1Q8N123 301 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 REPS2Q8NFH8 660 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 SLF1Q9BQI6 1058 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 DIS3Q9Y2L1 958 aaKnown RBP21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 CTDP1Q9Y5B0 961 aaPredicted RBP21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 ROBO3Q96MS0 1386 aa21.35■■□□□ 1.01
PDLIM4-202ENST00000379018 MYADML2A6NDP7 307 aa21.34■■□□□ 1.01
PDLIM4-202ENST00000379018 COPB2P35606 906 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms