RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 NLRP3Q96P20 1036 aa22.14■■□□□ 1.14
SHROOM1-202ENST00000378676 IRS2Q9Y4H2 1338 aa22.14■■□□□ 1.13
SHROOM1-202ENST00000378676 RBL2Q08999 1139 aa22.14■■□□□ 1.13
SHROOM1-202ENST00000378676 KARSQ15046 597 aaKnown RBP22.14■■□□□ 1.13
SHROOM1-202ENST00000378676 KRT222Q8N1A0 295 aa22.14■■□□□ 1.13
SHROOM1-202ENST00000378676 IGSF22Q8N9C0 903 aa22.14■■□□□ 1.13
SHROOM1-202ENST00000378676 MNS1Q8NEH6 495 aa22.14■■□□□ 1.13
SHROOM1-202ENST00000378676 KIFC2Q96AC6 838 aa22.14■■□□□ 1.13
SHROOM1-202ENST00000378676 GOLGA6L9A6NEM1 432 aa22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 NBPF5PQ86XG9 351 aaPredicted RBP22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 GPKOWQ92917 476 aaPredicted RBP eCLIP22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 PANX2Q96RD6 677 aa22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 MCM9Q9NXL9 1143 aa22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 CASQ1P31415 396 aa22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 FAM98CQ17RN3 349 aaKnown RBP22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 RAD9BQ6WBX8 426 aa22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 CPLX3Q8WVH0 158 aa22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 ANKRD2Q9GZV1 360 aa22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 NARFQ9UHQ1 456 aa22.13■■□□□ 1.13
SHROOM1-202ENST00000378676 TRAPPC10P48553 1259 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 UBXN4Q92575 508 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 SRRTQ9BXP5 876 aaKnown RBP22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 NYXQ9GZU5 481 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 A0A0U1RQJ8 604 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 STAG2Q8N3U4 1231 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 IQUBQ8NA54 791 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 RASGRP4Q8TDF6 673 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 ATRIPQ8WXE1 791 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 SETDB2Q96T68 719 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 IL17RBQ9NRM6 502 aa22.12■■□□□ 1.13
SHROOM1-202ENST00000378676 TAF1LQ8IZX4 1826 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 DZIP1Q86YF9 867 aaKnown RBP22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 DYNLL2Q96FJ2 89 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 CDC25AP30304 524 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 MAP3K9P80192 1104 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 TFAP4Q01664 338 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 RRAGBQ5VZM2 374 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 TYW1BQ6NUM6 668 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 AMIGO3Q86WK7 504 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 C4orf32Q8N8J7 132 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 IRX2Q9BZI1 471 aaPredicted RBP22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 MRFAP1Q9Y605 127 aa22.11■■□□□ 1.13
SHROOM1-202ENST00000378676 MFAP3LO75121 409 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 TM4SF1P30408 202 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 HSPA1LP34931 641 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 CCT6AP40227 531 aaKnown RBP22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 SLC35G1Q2M3R5 365 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 PPFIBP1Q86W92 1011 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 BLIDQ8IZY5 108 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 EPC1Q9H2F5 836 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 KAT14Q9H8E8 782 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 ST7Q9NRC1 585 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 MKRN1Q9UHC7 482 aaKnown RBP22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 GTPBP6O43824 516 aaPredicted RBP22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 GYPCP04921 128 aa22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 GABPB1Q06547 395 aaPredicted RBP22.1■■□□□ 1.13
SHROOM1-202ENST00000378676 EFCAB8A8MWE9 144 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 RGL2O15211 777 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 CASP14P31944 242 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 KIF5BP33176 963 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 KRT31Q15323 416 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 C12orf60Q5U649 245 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 PNMA1Q8ND90 353 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 CTAGE1Q96RT6 745 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 FHOD1Q9Y613 1164 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 ADGRG1Q9Y653 693 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 CCDC175P0C221 793 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 FXR1P51114 621 aaKnown RBP eCLIP22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 SH3RF3Q8TEJ3 882 aaPredicted RBP22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 USP21Q9UK80 565 aa22.09■■□□□ 1.13
SHROOM1-202ENST00000378676 GNPATO15228 680 aa22.08■■□□□ 1.13
SHROOM1-202ENST00000378676 RPS6KA4O75676 772 aa22.08■■□□□ 1.13
SHROOM1-202ENST00000378676 GRIK5Q16478 980 aa22.08■■□□□ 1.13
SHROOM1-202ENST00000378676 GDAQ9Y2T3 454 aa22.08■■□□□ 1.13
SHROOM1-202ENST00000378676 USP17L3A6NCW0 530 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 USP17L4A6NCW7 530 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 PPP2R3AQ06190 1150 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 FILIP1LQ4L180 1135 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 USP17L1Q7RTZ2 530 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 LZTFL1Q9NQ48 299 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 LIMA1Q9UHB6 759 aaKnown RBP22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 PCDHA4Q9UN74 947 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 A0A0U1RQG5 324 aaPredicted RBP22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 CALML3P27482 149 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 USP5P45974 858 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 GRM4Q14833 912 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 MAD2L2Q9UI95 211 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 RWDD2AQ9UIY3 292 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 ROBO3Q96MS0 1386 aa22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 DDX60LQ5H9U9 1706 aaKnown RBP22.07■■□□□ 1.12
SHROOM1-202ENST00000378676 M0R2N6 131 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 PAK1Q13153 545 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 ARL6IP4Q66PJ3 421 aaKnown RBP22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 SLC44A5Q8NCS7 719 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 CCDC12Q8WUD4 166 aaPredicted RBP22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 NELFBQ8WX92 580 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 NAA15Q9BXJ9 866 aaKnown RBP22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 TAB2Q9NYJ8 693 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 ITIH6Q6UXX5 1313 aa22.06■■□□□ 1.12
SHROOM1-202ENST00000378676 PP2D1A8MPX8 630 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms