RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 NUDT12Q9BQG2 462 aa20.2■□□□□ 0.82
RER1-202ENST00000378512 HOXC10Q9NYD6 342 aa20.2■□□□□ 0.82
RER1-202ENST00000378512 ADAMTS5Q9UNA0 930 aa20.2■□□□□ 0.82
RER1-202ENST00000378512 ALPK3Q96L96 1907 aa20.2■□□□□ 0.82
RER1-202ENST00000378512 RANBP2P49792 3224 aaKnown RBP20.2■□□□□ 0.82
RER1-202ENST00000378512 ZNF236Q9UL36 1845 aa20.2■□□□□ 0.82
RER1-202ENST00000378512 MAPK4P31152 587 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 NOVP48745 357 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 MNX1P50219 401 aaPredicted RBP20.19■□□□□ 0.82
RER1-202ENST00000378512 CTDSPL2Q05D32 466 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 MORN1Q5T089 497 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 CWC27Q6UX04 472 aaKnown RBP20.19■□□□□ 0.82
RER1-202ENST00000378512 HTATIP2Q9BUP3 242 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 GOPCQ9HD26 462 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 DIAPH3Q9NSV4 1193 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 RPTORQ8N122 1335 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 PRKAR2AP13861 404 aaKnown RBP20.19■□□□□ 0.82
RER1-202ENST00000378512 DSG3P32926 999 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 MAP3K21Q5TCX8 1036 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 PLEKHH3Q7Z736 793 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 SPICE1Q8N0Z3 855 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 SOCS4Q8WXH5 440 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 NBPF3Q9H094 633 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 HMX1Q9NP08 348 aaPredicted RBP20.19■□□□□ 0.82
RER1-202ENST00000378512 PCDH10Q9P2E7 1040 aa20.19■□□□□ 0.82
RER1-202ENST00000378512 TSPY3P0CV98 308 aa20.18■□□□□ 0.82
RER1-202ENST00000378512 TSPY8P0CW00 308 aa20.18■□□□□ 0.82
RER1-202ENST00000378512 TFAP4Q01664 338 aa20.18■□□□□ 0.82
RER1-202ENST00000378512 TANGO6Q9C0B7 1094 aa20.18■□□□□ 0.82
RER1-202ENST00000378512 IL25Q9H293 177 aa20.18■□□□□ 0.82
RER1-202ENST00000378512 INCENPQ9NQS7 918 aa20.18■□□□□ 0.82
RER1-202ENST00000378512 RBM27Q9P2N5 1060 aaKnown RBP20.18■□□□□ 0.82
RER1-202ENST00000378512 F5H6K3 240 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 TTLL1O95922 423 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 PCP11498 1178 aaKnown RBP20.17■□□□□ 0.82
RER1-202ENST00000378512 ATP2B2Q01814 1243 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 KLRC3Q07444 240 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 CACNB2Q08289 660 aaPredicted RBP20.17■□□□□ 0.82
RER1-202ENST00000378512 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
RER1-202ENST00000378512 CCAR1Q8IX12 1150 aaKnown RBP20.17■□□□□ 0.82
RER1-202ENST00000378512 MB21D1Q8N884 522 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 DSCC1Q9BVC3 393 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 IL17RBQ9NRM6 502 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 FLRT1Q9NZU1 646 aa20.17■□□□□ 0.82
RER1-202ENST00000378512 TRIOBPQ9H2D6 2365 aa20.16■□□□□ 0.82
RER1-202ENST00000378512 XRCC5P13010 732 aaKnown RBP20.16■□□□□ 0.82
RER1-202ENST00000378512 ZKSCAN1P17029 563 aaPredicted RBP20.16■□□□□ 0.82
RER1-202ENST00000378512 CCND3P30281 292 aaPredicted RBP20.16■□□□□ 0.82
RER1-202ENST00000378512 CCNA1P78396 465 aa20.16■□□□□ 0.82
RER1-202ENST00000378512 WDR78Q5VTH9 848 aa20.16■□□□□ 0.82
RER1-202ENST00000378512 GMCL1P1Q8NEA9 526 aa20.16■□□□□ 0.82
RER1-202ENST00000378512 CLIP2Q9UDT6 1046 aa20.16■□□□□ 0.82
RER1-202ENST00000378512 SZT2Q5T011 3432 aa20.16■□□□□ 0.82
RER1-202ENST00000378512 RAD50Q92878 1312 aa20.16■□□□□ 0.82
RER1-202ENST00000378512 ZNFX1Q9P2E3 1918 aaKnown RBP20.15■□□□□ 0.82
RER1-202ENST00000378512 FLOT1O75955 427 aa20.15■□□□□ 0.82
RER1-202ENST00000378512 NDUFB10O96000 172 aa20.15■□□□□ 0.82
RER1-202ENST00000378512 RGS2P41220 211 aa20.15■□□□□ 0.82
RER1-202ENST00000378512 STAG1Q8WVM7 1258 aa20.15■□□□□ 0.82
RER1-202ENST00000378512 EVI5O60447 810 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 CHMLP26374 656 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 MAP2K5Q13163 448 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 PPP4R3BQ5MIZ7 849 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 NECAB2Q7Z6G3 386 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 SHCBP1Q8NEM2 672 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 ATG4CQ96DT6 458 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 APBA2Q99767 749 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 PRO3102Q9H379 93 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 CWC22Q9HCG8 908 aaKnown RBP20.14■□□□□ 0.81
RER1-202ENST00000378512 TCP11L1Q9NUJ3 509 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 FBXO28Q9NVF7 368 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 PPP1R9AQ9ULJ8 1098 aa20.14■□□□□ 0.81
RER1-202ENST00000378512 TSPY2A6NKD2 308 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 NT5C2P49902 561 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 FAM83BQ5T0W9 1011 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 AKNAD1Q5T1N1 836 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 TBC1D10CQ8IV04 446 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 REPS2Q8NFH8 660 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 MOV10L1Q9BXT6 1211 aaKnown RBP20.13■□□□□ 0.81
RER1-202ENST00000378512 SPATC1LQ9H0A9 340 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 OGDHLQ9ULD0 1010 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 NR2E3Q9Y5X4 410 aa20.13■□□□□ 0.81
RER1-202ENST00000378512 PTPREP23469 700 aa20.12■□□□□ 0.81
RER1-202ENST00000378512 HAND2P61296 217 aa20.12■□□□□ 0.81
RER1-202ENST00000378512 NPLOC4Q8TAT6 608 aa20.12■□□□□ 0.81
RER1-202ENST00000378512 VWA5AO00534 786 aa20.11■□□□□ 0.81
RER1-202ENST00000378512 GRB14Q14449 540 aa20.11■□□□□ 0.81
RER1-202ENST00000378512 TMEM132BQ14DG7 1078 aa20.11■□□□□ 0.81
RER1-202ENST00000378512 LHX8Q68G74 356 aa20.11■□□□□ 0.81
RER1-202ENST00000378512 SAMD1Q6SPF0 538 aaPredicted RBP20.11■□□□□ 0.81
RER1-202ENST00000378512 C7orf61Q8IZ16 206 aa20.11■□□□□ 0.81
RER1-202ENST00000378512 ANKLE1Q8NAG6 615 aa20.11■□□□□ 0.81
RER1-202ENST00000378512 NUP88Q99567 741 aaPredicted RBP20.11■□□□□ 0.81
RER1-202ENST00000378512 ZNF214Q9UL59 606 aaPredicted RBP20.11■□□□□ 0.81
RER1-202ENST00000378512 SLC15A5A6NIM6 579 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 RANBP6O60518 1105 aaKnown RBP20.1■□□□□ 0.81
RER1-202ENST00000378512 NMT2O60551 498 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 IGHA2P01877 340 aa20.1■□□□□ 0.81
RER1-202ENST00000378512 HOXC6P09630 235 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms