RNA–Protein interactions for RNA: ENST00000377782.7

TNFRSF25-205, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-205ENST00000377782 U2AF2P26368 475 aaKnown RBP eCLIP29.53■■■□□ 2.32
TNFRSF25-205ENST00000377782 SLC35G1Q2M3R5 365 aa29.53■■■□□ 2.32
TNFRSF25-205ENST00000377782 DCAF15Q66K64 600 aa29.53■■■□□ 2.32
TNFRSF25-205ENST00000377782 PIBF1Q8WXW3 757 aa29.53■■■□□ 2.32
TNFRSF25-205ENST00000377782 L3MBTL3Q96JM7 780 aaPredicted RBP29.53■■■□□ 2.32
TNFRSF25-205ENST00000377782 POLR2AP24928 1970 aaKnown RBP29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 PHF20L1A8MW92 1017 aa29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 ASNSP08243 561 aa29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 CCDC96Q2M329 555 aa29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 NBPF12Q5TAG4 269 aaPredicted RBP29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 SLFN13Q68D06 897 aa29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 PHF20Q9BVI0 1012 aa29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 RIOX1Q9H6W3 641 aa29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 SH3GLB2Q9NR46 395 aa29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 TFIP11Q9UBB9 837 aaKnown RBP29.52■■■□□ 2.32
TNFRSF25-205ENST00000377782 DIS3L2Q8IYB7 885 aaKnown RBP29.51■■■□□ 2.31
TNFRSF25-205ENST00000377782 RRP36Q96EU6 259 aaKnown RBP29.51■■■□□ 2.31
TNFRSF25-205ENST00000377782 FOXP1Q9H334 677 aaPredicted RBP29.51■■■□□ 2.31
TNFRSF25-205ENST00000377782 GPCPD1Q9NPB8 672 aa29.51■■■□□ 2.31
TNFRSF25-205ENST00000377782 GINM1Q9NU53 330 aa29.51■■■□□ 2.31
TNFRSF25-205ENST00000377782 DDX49Q9Y6V7 483 aaKnown RBP29.51■■■□□ 2.31
TNFRSF25-205ENST00000377782 F5H6K3 240 aa29.5■■■□□ 2.31
TNFRSF25-205ENST00000377782 KLRC3Q07444 240 aa29.5■■■□□ 2.31
TNFRSF25-205ENST00000377782 ELP1O95163 1332 aa29.5■■■□□ 2.31
TNFRSF25-205ENST00000377782 RAD21O60216 631 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 SLC1A4P43007 532 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 MYSM1Q5VVJ2 828 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 SPATA32Q96LK8 384 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 UBA5Q9GZZ9 404 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 CPVLQ9H3G5 476 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 BRMS1Q9HCU9 246 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 SEC63Q9UGP8 760 aaKnown RBP29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 BTBD18B2RXH4 712 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 KLHL40Q2TBA0 621 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 FAM177A1Q8N128 213 aaPredicted RBP29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 SHISA4Q96DD7 197 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 GMCL1Q96IK5 515 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 ZNF341Q9BYN7 854 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 TMX2Q9Y320 296 aa29.49■■■□□ 2.31
TNFRSF25-205ENST00000377782 A0A1W2PRG0 241 aa29.48■■■□□ 2.31
TNFRSF25-205ENST00000377782 NOSTRINQ8IVI9 506 aa29.48■■■□□ 2.31
TNFRSF25-205ENST00000377782 SH2D4AQ9H788 454 aa29.48■■■□□ 2.31
TNFRSF25-205ENST00000377782 SCN4AP35499 1836 aa29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 GLTPD2A6NH11 291 aa29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 CTNND1O60716 968 aaKnown RBP29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 MBD3O95983 291 aa29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 KRT2P35908 639 aa29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 KCTD1Q719H9 257 aa29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 LEO1Q8WVC0 666 aaPredicted RBP29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 VAT1LQ9HCJ6 419 aa29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 SRCAPQ6ZRS2 3230 aa29.47■■■□□ 2.31
TNFRSF25-205ENST00000377782 USP50Q70EL3 339 aaPredicted RBP29.46■■■□□ 2.31
TNFRSF25-205ENST00000377782 DCPSQ96C86 337 aaKnown RBP29.46■■■□□ 2.31
TNFRSF25-205ENST00000377782 USP28Q96RU2 1077 aa29.46■■■□□ 2.31
TNFRSF25-205ENST00000377782 GOPCQ9HD26 462 aa29.46■■■□□ 2.31
TNFRSF25-205ENST00000377782 DOCK1Q14185 1865 aa29.46■■■□□ 2.31
TNFRSF25-205ENST00000377782 SOCS7O14512 581 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 NDUFB10O96000 172 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 VEGFAP15692 232 aaPredicted RBP29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 CALML3P27482 149 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 NLRP5P59047 1200 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 UBE2HP62256 183 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 HOMER1Q86YM7 354 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 CCDC148Q8NFR7 591 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 GPKOWQ92917 476 aaPredicted RBP eCLIP29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 PIGSQ96S52 555 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 BARHL2Q9NY43 387 aa29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 ISY1Q9ULR0 285 aaKnown RBP29.45■■■□□ 2.31
TNFRSF25-205ENST00000377782 GADD45BO75293 160 aaPredicted RBP29.45■■■□□ 2.3
TNFRSF25-205ENST00000377782 ECE1P42892 770 aa29.45■■■□□ 2.3
TNFRSF25-205ENST00000377782 SUPT20HL1Q3ZLR7 823 aa29.45■■■□□ 2.3
TNFRSF25-205ENST00000377782 WWC2Q6AWC2 1192 aa29.45■■■□□ 2.3
TNFRSF25-205ENST00000377782 TTBK2Q6IQ55 1244 aa29.45■■■□□ 2.3
TNFRSF25-205ENST00000377782 HEATR3Q7Z4Q2 680 aa29.45■■■□□ 2.3
TNFRSF25-205ENST00000377782 ADGRF4Q8IZF3 695 aa29.45■■■□□ 2.3
TNFRSF25-205ENST00000377782 hCG_1984214I3L0E3 225 aa29.44■■■□□ 2.3
TNFRSF25-205ENST00000377782 CEBPZQ03701 1054 aaKnown RBP29.44■■■□□ 2.3
TNFRSF25-205ENST00000377782 ZNF713Q8N859 430 aaPredicted RBP29.44■■■□□ 2.3
TNFRSF25-205ENST00000377782 ACER1Q8TDN7 264 aa29.44■■■□□ 2.3
TNFRSF25-205ENST00000377782 CCDC12Q8WUD4 166 aaPredicted RBP29.44■■■□□ 2.3
TNFRSF25-205ENST00000377782 RTEL1Q9NZ71 1219 aa29.44■■■□□ 2.3
TNFRSF25-205ENST00000377782 ZNF112Q9UJU3 913 aa29.44■■■□□ 2.3
TNFRSF25-205ENST00000377782 BMP3P12645 472 aa29.43■■■□□ 2.3
TNFRSF25-205ENST00000377782 EPHX2P34913 555 aa29.43■■■□□ 2.3
TNFRSF25-205ENST00000377782 PRAMEF18Q5VWM3 479 aa29.43■■■□□ 2.3
TNFRSF25-205ENST00000377782 GPT2Q8TD30 523 aa29.43■■■□□ 2.3
TNFRSF25-205ENST00000377782 OXER1Q8TDS5 423 aa29.43■■■□□ 2.3
TNFRSF25-205ENST00000377782 JMJD4Q9H9V9 463 aa29.43■■■□□ 2.3
TNFRSF25-205ENST00000377782 POLR3EQ9NVU0 708 aa29.43■■■□□ 2.3
TNFRSF25-205ENST00000377782 RCOR1Q9UKL0 485 aa29.43■■■□□ 2.3
TNFRSF25-205ENST00000377782 STXBP3O00186 592 aa29.42■■■□□ 2.3
TNFRSF25-205ENST00000377782 NR5A1Q13285 461 aa29.42■■■□□ 2.3
TNFRSF25-205ENST00000377782 SULF1Q8IWU6 871 aa29.42■■■□□ 2.3
TNFRSF25-205ENST00000377782 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.42■■■□□ 2.3
TNFRSF25-205ENST00000377782 NPY5RQ15761 445 aa29.42■■■□□ 2.3
TNFRSF25-205ENST00000377782 GALNT17Q6IS24 598 aa29.42■■■□□ 2.3
TNFRSF25-205ENST00000377782 FTOQ9C0B1 505 aaKnown RBP eCLIP29.42■■■□□ 2.3
TNFRSF25-205ENST00000377782 SLC16A2P36021 539 aa29.41■■■□□ 2.3
TNFRSF25-205ENST00000377782 ZC3H15Q8WU90 426 aaKnown RBP29.41■■■□□ 2.3
TNFRSF25-205ENST00000377782 VCPKMTQ9H867 229 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms