RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 SLFN13Q68D06 897 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 USP17L2Q6R6M4 530 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 CCDC144CPQ8IYA2 1237 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 DCAF4Q8WV16 495 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 CNKSR2Q8WXI2 1034 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 CHMP4CQ96CF2 233 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 TMX3Q96JJ7 454 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 AFG3L2Q9Y4W6 797 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 CASP8AP2Q9UKL3 1982 aa22.38■■□□□ 1.17
SPSB1-203ENST00000377399 CCDC196A0A1B0GTZ2 297 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 C19orf81C9J6K1 198 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 F5H6K3 240 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 PFKFB2O60825 505 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 LARGE1O95461 756 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 BACE1P56817 501 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 MLLT1Q03111 559 aaPredicted RBP22.37■■□□□ 1.17
SPSB1-203ENST00000377399 KLRC3Q07444 240 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 TROAPQ12815 778 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 ME3Q16798 604 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 REM2Q8IYK8 340 aaPredicted RBP22.37■■□□□ 1.17
SPSB1-203ENST00000377399 LPAR1Q92633 364 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 MAP3K14Q99558 947 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 RBM28Q9NW13 759 aaKnown RBP22.37■■□□□ 1.17
SPSB1-203ENST00000377399 TMOD4Q9NZQ9 345 aa22.37■■□□□ 1.17
SPSB1-203ENST00000377399 NDUFB10O96000 172 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 SLC10A3P09131 477 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 PARP1P09874 1014 aaKnown RBP22.36■■□□□ 1.17
SPSB1-203ENST00000377399 PDHBP11177 359 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 SLC1A4P43007 532 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 CCT2P78371 535 aaKnown RBP22.36■■□□□ 1.17
SPSB1-203ENST00000377399 GRM4Q14833 912 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 PPP2R5BQ15173 497 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 ASPRV1Q53RT3 343 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 FANCBQ8NB91 859 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 WNK4Q96J92 1243 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 NID2Q14112 1375 aa22.36■■□□□ 1.17
SPSB1-203ENST00000377399 CXCL11O14625 94 aa22.35■■□□□ 1.17
SPSB1-203ENST00000377399 CPLX1O14810 134 aa22.35■■□□□ 1.17
SPSB1-203ENST00000377399 IRF6O14896 467 aa22.35■■□□□ 1.17
SPSB1-203ENST00000377399 DHX16O60231 1041 aaKnown RBP22.35■■□□□ 1.17
SPSB1-203ENST00000377399 HMGCS2P54868 508 aa22.35■■□□□ 1.17
SPSB1-203ENST00000377399 CPLX2Q6PUV4 134 aaKnown RBP22.35■■□□□ 1.17
SPSB1-203ENST00000377399 SPICE1Q8N0Z3 855 aa22.35■■□□□ 1.17
SPSB1-203ENST00000377399 GTF3C6Q969F1 213 aa22.35■■□□□ 1.17
SPSB1-203ENST00000377399 GMCL1Q96IK5 515 aa22.35■■□□□ 1.17
SPSB1-203ENST00000377399 HPS5Q9UPZ3 1129 aa22.35■■□□□ 1.17
SPSB1-203ENST00000377399 SNHG28P0DPA3 235 aa22.34■■□□□ 1.17
SPSB1-203ENST00000377399 GNAQP50148 359 aa22.34■■□□□ 1.17
SPSB1-203ENST00000377399 GPATCH4Q5T3I0 446 aaKnown RBP22.34■■□□□ 1.17
SPSB1-203ENST00000377399 CCDC83Q8IWF9 413 aa22.34■■□□□ 1.17
SPSB1-203ENST00000377399 NECAB1Q8N987 351 aa22.34■■□□□ 1.17
SPSB1-203ENST00000377399 NCOA5Q9HCD5 579 aaKnown RBP22.34■■□□□ 1.17
SPSB1-203ENST00000377399 RNF186Q9NXI6 227 aa22.34■■□□□ 1.17
SPSB1-203ENST00000377399 DAXXQ9UER7 740 aaPredicted RBP22.34■■□□□ 1.17
SPSB1-203ENST00000377399 KCNH4Q9UQ05 1017 aa22.34■■□□□ 1.17
SPSB1-203ENST00000377399 FRMPD2Q68DX3 1309 aaPredicted RBP22.33■■□□□ 1.17
SPSB1-203ENST00000377399 WDR46O15213 610 aaKnown RBP22.33■■□□□ 1.17
SPSB1-203ENST00000377399 TRPA1O75762 1119 aa22.33■■□□□ 1.17
SPSB1-203ENST00000377399 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.17
SPSB1-203ENST00000377399 ZBTB48P10074 688 aaPredicted RBP22.33■■□□□ 1.17
SPSB1-203ENST00000377399 BMP3P12645 472 aa22.33■■□□□ 1.17
SPSB1-203ENST00000377399 ZNF543Q08ER8 600 aa22.33■■□□□ 1.17
SPSB1-203ENST00000377399 SCRN1Q12765 414 aa22.33■■□□□ 1.17
SPSB1-203ENST00000377399 SNAPC2Q13487 334 aa22.33■■□□□ 1.17
SPSB1-203ENST00000377399 RASGRP2Q7LDG7 609 aa22.33■■□□□ 1.17
SPSB1-203ENST00000377399 C12orf42Q96LP6 360 aa22.33■■□□□ 1.17
SPSB1-203ENST00000377399 PTPRFP10586 1907 aa22.33■■□□□ 1.16
SPSB1-203ENST00000377399 A0A0G2JLL6 359 aaPredicted RBP22.32■■□□□ 1.16
SPSB1-203ENST00000377399 CDKL5O76039 1030 aa22.32■■□□□ 1.16
SPSB1-203ENST00000377399 GJA5P36382 358 aa22.32■■□□□ 1.16
SPSB1-203ENST00000377399 IKQ13123 557 aaPredicted RBP22.32■■□□□ 1.16
SPSB1-203ENST00000377399 SH3D19Q5HYK7 790 aa22.32■■□□□ 1.16
SPSB1-203ENST00000377399 SPRYD7Q5W111 196 aa22.32■■□□□ 1.16
SPSB1-203ENST00000377399 GADL1Q6ZQY3 521 aa22.32■■□□□ 1.16
SPSB1-203ENST00000377399 PRRT2Q7Z6L0 340 aaPredicted RBP22.32■■□□□ 1.16
SPSB1-203ENST00000377399 GPCPD1Q9NPB8 672 aa22.32■■□□□ 1.16
SPSB1-203ENST00000377399 EMILIN3Q9NT22 766 aa22.32■■□□□ 1.16
SPSB1-203ENST00000377399 GOLGA8HP0CJ92 632 aa22.31■■□□□ 1.16
SPSB1-203ENST00000377399 VCAM1P19320 739 aa22.31■■□□□ 1.16
SPSB1-203ENST00000377399 GTF2A2P52657 109 aa22.31■■□□□ 1.16
SPSB1-203ENST00000377399 MKRN3Q13064 507 aaKnown RBP22.31■■□□□ 1.16
SPSB1-203ENST00000377399 FAM83BQ5T0W9 1011 aa22.31■■□□□ 1.16
SPSB1-203ENST00000377399 KCTD1Q719H9 257 aa22.31■■□□□ 1.16
SPSB1-203ENST00000377399 RASAL3Q86YV0 1011 aa22.31■■□□□ 1.16
SPSB1-203ENST00000377399 NUP88Q99567 741 aaPredicted RBP22.31■■□□□ 1.16
SPSB1-203ENST00000377399 LZTS2Q9BRK4 669 aa22.31■■□□□ 1.16
SPSB1-203ENST00000377399 MAD2L2Q9UI95 211 aa22.31■■□□□ 1.16
SPSB1-203ENST00000377399 LOC285556D6RIA3 1793 aa22.3■■□□□ 1.16
SPSB1-203ENST00000377399 PALM3A6NDB9 673 aaPredicted RBP22.3■■□□□ 1.16
SPSB1-203ENST00000377399 CDC27P30260 824 aa22.3■■□□□ 1.16
SPSB1-203ENST00000377399 KIAA1755Q5JYT7 1200 aa22.3■■□□□ 1.16
SPSB1-203ENST00000377399 TMTC3Q6ZXV5 915 aa22.3■■□□□ 1.16
SPSB1-203ENST00000377399 FASTKD5Q7L8L6 764 aaKnown RBP22.3■■□□□ 1.16
SPSB1-203ENST00000377399 PROCA1Q8NCQ7 364 aaPredicted RBP22.3■■□□□ 1.16
SPSB1-203ENST00000377399 TANGO6Q9C0B7 1094 aa22.3■■□□□ 1.16
SPSB1-203ENST00000377399 KLRF2D3W0D1 207 aa22.29■■□□□ 1.16
SPSB1-203ENST00000377399 PLEKHA8P1O95397 391 aa22.29■■□□□ 1.16
SPSB1-203ENST00000377399 CETPP11597 493 aa22.29■■□□□ 1.16
SPSB1-203ENST00000377399 ADD1P35611 737 aaKnown RBP22.29■■□□□ 1.16
SPSB1-203ENST00000377399 CUL4AQ13619 759 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms