RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 STAG2Q8N3U4 1231 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 FANCBQ8NB91 859 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 DCAF4Q8WV16 495 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 LPAR1Q92633 364 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 HHIPL1Q96JK4 782 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 ZSCAN31Q96LW9 406 aaPredicted RBP24.85■■□□□ 1.57
CBWD3-202ENST00000377342 SLKQ9H2G2 1235 aaPredicted RBP24.85■■□□□ 1.57
CBWD3-202ENST00000377342 SH2B1Q9NRF2 756 aaPredicted RBP24.85■■□□□ 1.57
CBWD3-202ENST00000377342 CREBZFQ9NS37 354 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 FRMPD2Q68DX3 1309 aaPredicted RBP24.85■■□□□ 1.57
CBWD3-202ENST00000377342 MYH6P13533 1939 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 SLC10A3P09131 477 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 GOLGA8HP0CJ92 632 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 ZBTB48P10074 688 aaPredicted RBP24.85■■□□□ 1.57
CBWD3-202ENST00000377342 VCAM1P19320 739 aa24.85■■□□□ 1.57
CBWD3-202ENST00000377342 ZNF157P51786 506 aaPredicted RBP24.85■■□□□ 1.57
CBWD3-202ENST00000377342 PALM3A6NDB9 673 aaPredicted RBP24.84■■□□□ 1.57
CBWD3-202ENST00000377342 MKRN3Q13064 507 aaKnown RBP24.84■■□□□ 1.57
CBWD3-202ENST00000377342 FAM155AB1AL88 458 aaPredicted RBP24.83■■□□□ 1.57
CBWD3-202ENST00000377342 PLEKHA8P1O95397 391 aa24.83■■□□□ 1.57
CBWD3-202ENST00000377342 PARP1P09874 1014 aaKnown RBP24.83■■□□□ 1.57
CBWD3-202ENST00000377342 ANP32AP39687 249 aaKnown RBP24.83■■□□□ 1.57
CBWD3-202ENST00000377342 SLC1A4P43007 532 aa24.83■■□□□ 1.57
CBWD3-202ENST00000377342 CCDC96Q2M329 555 aa24.83■■□□□ 1.57
CBWD3-202ENST00000377342 SLC35G1Q2M3R5 365 aa24.83■■□□□ 1.57
CBWD3-202ENST00000377342 ASPRV1Q53RT3 343 aa24.83■■□□□ 1.57
CBWD3-202ENST00000377342 FAM83BQ5T0W9 1011 aa24.83■■□□□ 1.57
CBWD3-202ENST00000377342 KCTD1Q719H9 257 aa24.83■■□□□ 1.57
CBWD3-202ENST00000377342 CTCFLQ8NI51 663 aaPredicted RBP24.83■■□□□ 1.57
CBWD3-202ENST00000377342 MS4A4AQ96JQ5 239 aa24.83■■□□□ 1.57
CBWD3-202ENST00000377342 WDR46O15213 610 aaKnown RBP24.82■■□□□ 1.56
CBWD3-202ENST00000377342 ADD1P35611 737 aaKnown RBP24.82■■□□□ 1.56
CBWD3-202ENST00000377342 TMTC3Q6ZXV5 915 aa24.82■■□□□ 1.56
CBWD3-202ENST00000377342 CCDC83Q8IWF9 413 aa24.82■■□□□ 1.56
CBWD3-202ENST00000377342 BMP3P12645 472 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 SNAPC2Q13487 334 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 CPVLQ9H3G5 476 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 A0A0G2JMZ2 1700 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 RASSF10A6NK89 507 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 DTNBO60941 627 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 CTDNEP1O95476 244 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 KIF5BP33176 963 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 NTRK3Q16288 839 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 TREML2Q5T2D2 321 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 GPATCH4Q5T3I0 446 aaKnown RBP24.81■■□□□ 1.56
CBWD3-202ENST00000377342 TTBK2Q6IQ55 1244 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 NBPF11Q86T75 865 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 CMTR1Q8N1G2 835 aaKnown RBP24.81■■□□□ 1.56
CBWD3-202ENST00000377342 PROCA1Q8NCQ7 364 aaPredicted RBP24.81■■□□□ 1.56
CBWD3-202ENST00000377342 GPCPD1Q9NPB8 672 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 RBM28Q9NW13 759 aaKnown RBP24.81■■□□□ 1.56
CBWD3-202ENST00000377342 TMOD4Q9NZQ9 345 aa24.81■■□□□ 1.56
CBWD3-202ENST00000377342 FUT2Q10981 343 aa24.8■■□□□ 1.56
CBWD3-202ENST00000377342 CUL4AQ13619 759 aa24.8■■□□□ 1.56
CBWD3-202ENST00000377342 RPAP3Q9H6T3 665 aaPredicted RBP24.8■■□□□ 1.56
CBWD3-202ENST00000377342 COL11A1P12107 1806 aaPredicted RBP24.8■■□□□ 1.56
CBWD3-202ENST00000377342 CNTNAP5Q8WYK1 1306 aa24.79■■□□□ 1.56
CBWD3-202ENST00000377342 KLRF2D3W0D1 207 aa24.79■■□□□ 1.56
CBWD3-202ENST00000377342 PPP2R5BQ15173 497 aa24.79■■□□□ 1.56
CBWD3-202ENST00000377342 SRBD1Q8N5C6 995 aaKnown RBP24.79■■□□□ 1.56
CBWD3-202ENST00000377342 THSD7BQ9C0I4 1608 aa24.79■■□□□ 1.56
CBWD3-202ENST00000377342 CYTH3O43739 400 aa24.78■■□□□ 1.56
CBWD3-202ENST00000377342 GTF2A2P52657 109 aa24.78■■□□□ 1.56
CBWD3-202ENST00000377342 GADL1Q6ZQY3 521 aa24.78■■□□□ 1.56
CBWD3-202ENST00000377342 BRI3BPQ8WY22 251 aa24.78■■□□□ 1.56
CBWD3-202ENST00000377342 CYP4F22Q6NT55 531 aa24.78■■□□□ 1.56
CBWD3-202ENST00000377342 GPAT2Q6NUI2 795 aa24.78■■□□□ 1.56
CBWD3-202ENST00000377342 FBXO28Q9NVF7 368 aa24.78■■□□□ 1.56
CBWD3-202ENST00000377342 ISY1Q9ULR0 285 aaKnown RBP24.78■■□□□ 1.56
CBWD3-202ENST00000377342 CCDC196A0A1B0GTZ2 297 aa24.77■■□□□ 1.56
CBWD3-202ENST00000377342 TMEM232C9JQI7 657 aa24.77■■□□□ 1.56
CBWD3-202ENST00000377342 SLC16A2P36021 539 aa24.77■■□□□ 1.56
CBWD3-202ENST00000377342 BTNL9Q6UXG8 535 aa24.77■■□□□ 1.56
CBWD3-202ENST00000377342 NSUN7Q8NE18 718 aaKnown RBP24.77■■□□□ 1.56
CBWD3-202ENST00000377342 CCDC102AQ96A19 550 aa24.77■■□□□ 1.56
CBWD3-202ENST00000377342 TANGO6Q9C0B7 1094 aa24.77■■□□□ 1.56
CBWD3-202ENST00000377342 UBA5Q9GZZ9 404 aa24.77■■□□□ 1.56
CBWD3-202ENST00000377342 AGTPBP1Q9UPW5 1226 aa24.77■■□□□ 1.56
CBWD3-202ENST00000377342 CCL15-CCL14A0A0B4J2E2 113 aa24.76■■□□□ 1.55
CBWD3-202ENST00000377342 PPFIA3O75145 1194 aa24.76■■□□□ 1.55
CBWD3-202ENST00000377342 CETPP11597 493 aa24.76■■□□□ 1.55
CBWD3-202ENST00000377342 IFNAR1P17181 557 aa24.76■■□□□ 1.55
CBWD3-202ENST00000377342 HTRA3P83110 453 aa24.76■■□□□ 1.55
CBWD3-202ENST00000377342 BECN1Q14457 450 aa24.76■■□□□ 1.55
CBWD3-202ENST00000377342 CCL15Q16663 113 aa24.76■■□□□ 1.55
CBWD3-202ENST00000377342 JAK2O60674 1132 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 GNAQP50148 359 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 STAT2P52630 851 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 FASTKD5Q7L8L6 764 aaKnown RBP24.75■■□□□ 1.55
CBWD3-202ENST00000377342 PHKBQ93100 1093 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 SPZ1Q9BXG8 430 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 TESPA1A2RU30 521 aaPredicted RBP24.75■■□□□ 1.55
CBWD3-202ENST00000377342 CPLX1O14810 134 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 DHX16O60231 1041 aaKnown RBP24.75■■□□□ 1.55
CBWD3-202ENST00000377342 PLA2G6O60733 806 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 CCDC82Q8N4S0 544 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 ZIC5Q96T25 663 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 FEM1BQ9UK73 627 aa24.75■■□□□ 1.55
CBWD3-202ENST00000377342 PTPDC1A2A3K4 754 aa24.74■■□□□ 1.55
CBWD3-202ENST00000377342 DEFB115Q30KQ5 88 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms