RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 UIMC1Q96RL1 719 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 IQCGQ9H095 443 aaKnown RBP19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 STMN4Q9H169 189 aaPredicted RBP19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 MLXIPQ9HAP2 919 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 SPC25Q9HBM1 224 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 ZNF75DP51815 510 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 SPECC1LQ69YQ0 1117 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 PPP1R14CQ8TAE6 165 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 GPKOWQ92917 476 aaPredicted RBP eCLIP19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 BLZF1Q9H2G9 400 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 KANSL2Q9H9L4 492 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 INCENPQ9NQS7 918 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 SASH1O94885 1247 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 SCRN1Q12765 414 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 ZNF589Q86UQ0 364 aaPredicted RBP19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 PPP1R9BQ96SB3 815 aa19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 NAP1L3Q99457 506 aaPredicted RBP19.89■□□□□ 0.77
CLSTN1-202ENST00000377298 NT5C2P49902 561 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 KRT222Q8N1A0 295 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 TAB2Q9NYJ8 693 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 PCDHB13Q9Y5F0 798 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 AFF2P51816 1311 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 OPA1O60313 960 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 ADRA2BP18089 450 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 ADCK5Q3MIX3 580 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 TMTC1Q8IUR5 882 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 COA1Q9GZY4 146 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 OVOS2A0A0G2JMS6 1433 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 OVOS2A0A0J9YW53 1432 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 OVOS2Q6IE36 1432 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 CLRN2A0PK11 232 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 TECP42680 631 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 ANKRD35Q8N283 1001 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 MMP10P09238 476 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 GADL1Q6ZQY3 521 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 GPBP1Q86WP2 473 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 FAM107BQ9H098 131 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 KIAA1468Q9P260 1216 aa19.88■□□□□ 0.77
CLSTN1-202ENST00000377298 VAV2P52735 878 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 CCDC117Q8IWD4 279 aaPredicted RBP19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 RTKN2Q8IZC4 609 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 MASTLQ96GX5 879 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 MTRF1LQ9UGC7 380 aaKnown RBP19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 DDX25Q9UHL0 483 aaKnown RBP19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 SPOPO43791 374 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 BCRP11274 1271 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 GTF2F1P35269 517 aaKnown RBP eCLIP19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 SUPT20HL1Q3ZLR7 823 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 NUCKS1Q9H1E3 243 aaKnown RBP19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 CCPG1Q9ULG6 757 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 LMTK2Q8IWU2 1503 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 HLFQ16534 295 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 LCORLQ8N3X6 602 aa19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 MAK16Q9BXY0 300 aaKnown RBP19.87■□□□□ 0.77
CLSTN1-202ENST00000377298 KRT9P35527 623 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 TRAPPC10P48553 1259 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 USP14P54578 494 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 PNOCQ13519 176 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 TMED8Q6PL24 325 aaPredicted RBP19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 DEPTORQ8TB45 409 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 OSBP2Q969R2 916 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 TEKT3Q9BXF9 490 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 PI16Q6UXB8 463 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 CCDC94Q9BW85 323 aaPredicted RBP19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 PLA2G4DQ86XP0 818 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 CSRNP2Q9H175 543 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 LONP1P36776 959 aaKnown RBP19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 CALCOCO2Q13137 446 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 SIRT2Q8IXJ6 389 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 MYOCDQ8IZQ8 938 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 TRIML1Q8N9V2 468 aa19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 RPAP1Q9BWH6 1393 aaPredicted RBP19.86■□□□□ 0.77
CLSTN1-202ENST00000377298 H0YCG3 227 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 TUBB2AQ13885 445 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 RASGRF1Q13972 1273 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 TUBB2BQ9BVA1 445 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 PPP1R7Q15435 360 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 HACE1Q8IYU2 909 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 PUS7LQ9H0K6 701 aaKnown RBP19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 FOXP1Q9H334 677 aaPredicted RBP19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 IGKV5-2P06315 115 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 TTLL6Q8N841 843 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 hCG_1984214I3L0E3 225 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 FMNL1O95466 1100 aaPredicted RBP19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 MCM6Q14566 821 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 RNF187Q5TA31 235 aaPredicted RBP19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 ZNF713Q8N859 430 aaPredicted RBP19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 JAKMIP2Q96AA8 810 aa19.85■□□□□ 0.77
CLSTN1-202ENST00000377298 MTX1Q13505 466 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 DALRD3Q5D0E6 543 aaKnown RBP19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 GOLGA5Q8TBA6 731 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 MED14O60244 1454 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 USP17L3A6NCW0 530 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 USP17L4A6NCW7 530 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 LAD1O00515 517 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 MAPK8IP2Q13387 824 aaPredicted RBP19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 USP17L1Q7RTZ2 530 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 PI4KBQ9UBF8 816 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 ATP2A2P16615 1042 aaKnown RBP19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 CCDC26Q8TAB7 109 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms