RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 FMR1NBQ8N0W7 255 aaPredicted RBP20.32■□□□□ 0.84
CTTN-203ENST00000376561 ZNF70Q9UC06 446 aaPredicted RBP20.32■□□□□ 0.84
CTTN-203ENST00000376561 PCDHB6Q9Y5E3 794 aa20.32■□□□□ 0.84
CTTN-203ENST00000376561 FAM205CA6NFA0 338 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 TCP10L2B9ZVM9 353 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 CMA1P23946 247 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 NDUFA8P51970 172 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 CKAP2LQ8IYA6 745 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 KINO60870 393 aaKnown RBP20.31■□□□□ 0.84
CTTN-203ENST00000376561 CALML3P27482 149 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 SPDYE2Q495Y8 402 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 ASPRV1Q53RT3 343 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 WWC2Q6AWC2 1192 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 MTMR14Q8NCE2 650 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 CSRNP1Q96S65 589 aa20.31■□□□□ 0.84
CTTN-203ENST00000376561 CCDC192P0DO97 292 aa20.3■□□□□ 0.84
CTTN-203ENST00000376561 TYW1BQ6NUM6 668 aa20.3■□□□□ 0.84
CTTN-203ENST00000376561 BARHL2Q9NY43 387 aa20.3■□□□□ 0.84
CTTN-203ENST00000376561 FRMPD2Q68DX3 1309 aaPredicted RBP20.3■□□□□ 0.84
CTTN-203ENST00000376561 HEATR3Q7Z4Q2 680 aa20.3■□□□□ 0.84
CTTN-203ENST00000376561 LTBP3Q9NS15 1303 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 CTAGE5O15320 804 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 CUTAO60888 179 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 ATP2B1P20020 1258 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 ATP2B2Q01814 1243 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 SHROOM1Q2M3G4 852 aaPredicted RBP20.29■□□□□ 0.84
CTTN-203ENST00000376561 NOM1Q5C9Z4 860 aaKnown RBP20.29■□□□□ 0.84
CTTN-203ENST00000376561 CCDC148Q8NFR7 591 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 FAM151AQ8WW52 585 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 RRP36Q96EU6 259 aaKnown RBP20.29■□□□□ 0.84
CTTN-203ENST00000376561 UBA5Q9GZZ9 404 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 RIOX1Q9H6W3 641 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 KANSL2Q9H9L4 492 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 CEP131Q9UPN4 1083 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 STXBP3O00186 592 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 SHC4Q6S5L8 630 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 BLIDQ8IZY5 108 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 CLIC6Q96NY7 704 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 NOL7Q9UMY1 257 aaKnown RBP20.29■□□□□ 0.84
CTTN-203ENST00000376561 PCDHA4Q9UN74 947 aa20.29■□□□□ 0.84
CTTN-203ENST00000376561 TRIM75PA6NK02 468 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 ADAMTS3O15072 1205 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 PFKFB1P16118 471 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 TNIP1Q15025 636 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 FKBP1CQ5VVH2 108 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 TMEM179Q6ZVK1 233 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 HOMER1Q86YM7 354 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 FAM177A1Q8N128 213 aaPredicted RBP20.28■□□□□ 0.84
CTTN-203ENST00000376561 KRI1Q8N9T8 703 aaKnown RBP20.28■□□□□ 0.84
CTTN-203ENST00000376561 NYAP2Q9P242 653 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 CNTNAP1P78357 1384 aa20.28■□□□□ 0.84
CTTN-203ENST00000376561 EEF2P13639 858 aaKnown RBP20.27■□□□□ 0.84
CTTN-203ENST00000376561 TYRO3Q06418 890 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 ZNF543Q08ER8 600 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 ANP32BQ92688 251 aaKnown RBP20.27■□□□□ 0.84
CTTN-203ENST00000376561 MKL1Q969V6 931 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 ZBED3Q96IU2 234 aaPredicted RBP20.27■□□□□ 0.84
CTTN-203ENST00000376561 VAT1LQ9HCJ6 419 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 SEC63Q9UGP8 760 aaKnown RBP20.27■□□□□ 0.84
CTTN-203ENST00000376561 HERC5Q9UII4 1024 aaKnown RBP20.27■□□□□ 0.84
CTTN-203ENST00000376561 GDF11O95390 407 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 PTPREP23469 700 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 SEPT2Q15019 361 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 ABCB5Q2M3G0 1257 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 GALNT17Q6IS24 598 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 PIK3AP1Q6ZUJ8 805 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 NLGN2Q8NFZ4 835 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 PIGSQ96S52 555 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 VEZTQ9HBM0 779 aa20.27■□□□□ 0.84
CTTN-203ENST00000376561 FBXO2Q9UK22 296 aaPredicted RBP20.27■□□□□ 0.84
CTTN-203ENST00000376561 ARFGEF1Q9Y6D6 1849 aa20.27■□□□□ 0.83
CTTN-203ENST00000376561 RASSF7Q02833 373 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 RESP18Q5W5W9 173 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 DAGLBQ8NCG7 672 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 GPCPD1Q9NPB8 672 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 HPSEQ9Y251 543 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 MORC2Q9Y6X9 1032 aaPredicted RBP20.26■□□□□ 0.83
CTTN-203ENST00000376561 FAM237AA0A1B0GTK4 181 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 M0R2N6 131 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 WNT10BO00744 389 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 MYO1BO43795 1136 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 ZNF202O95125 648 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 GPATCH4Q5T3I0 446 aaKnown RBP20.26■□□□□ 0.83
CTTN-203ENST00000376561 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.26■□□□□ 0.831e-10■■■□□ 18.2
CTTN-203ENST00000376561 MYOZ2Q9NPC6 264 aa20.26■□□□□ 0.83
CTTN-203ENST00000376561 WNT7AO00755 349 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 ICA1Q05084 483 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 TTC38Q5R3I4 469 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 SASS6Q6UVJ0 657 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 SIAH1Q8IUQ4 282 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 SRPRBQ9Y5M8 271 aaKnown RBP20.25■□□□□ 0.83
CTTN-203ENST00000376561 MRVI1Q9Y6F6 885 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 SHTN1A0MZ66 631 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 TRAPPC10P48553 1259 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 NAPAP54920 295 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 NBPF9Q3BBW0 867 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 RBM26Q5T8P6 1007 aaKnown RBP20.25■□□□□ 0.83
CTTN-203ENST00000376561 FAM83AQ86UY5 434 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 CCDC12Q8WUD4 166 aaPredicted RBP20.25■□□□□ 0.83
CTTN-203ENST00000376561 SDF4Q9BRK5 362 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms