RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 HSD3B7Q9H2F3 369 aa17.08■□□□□ 0.33
CCHCR1-201ENST00000376266 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 M0R2C6 588 aa17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 EIF3JO75822 258 aaKnown RBP17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 AGBL3Q8NEM8 1001 aa17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 KCNG4Q8TDN1 519 aa17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 CCDC12Q8WUD4 166 aaPredicted RBP17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 DRC1Q96MC2 740 aa17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 BAG1Q99933 345 aaPredicted RBP17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 CLIC4Q9Y696 253 aa17.08■□□□□ 0.32
CCHCR1-201ENST00000376266 NEDD4P46934 1319 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 TMEM232C9JQI7 657 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 DDNO94850 711 aaPredicted RBP17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 GMPSP49915 693 aaPredicted RBP17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 TMEM139Q8IV31 216 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 MAST3O60307 1309 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 MYL5Q02045 173 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 MCMDC2Q4G0Z9 681 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 GPC2Q8N158 579 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 KIFC2Q96AC6 838 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 HELLSQ9NRZ9 838 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 FAN1Q9Y2M0 1017 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 PCDHAC2Q9Y5I4 1007 aa17.07■□□□□ 0.32
CCHCR1-201ENST00000376266 SPTLC2O15270 562 aa17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 RPS6KA5O75582 802 aa17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 POLR3DP05423 398 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 USP17L8P0C7I0 530 aa17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 CHMP4BP1P59074 171 aa17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 GSTO1P78417 241 aa17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 PPM1EQ8WY54 764 aa17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 BEND6Q5SZJ8 279 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 TOGARAM2Q6ZUX3 1019 aa17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 HNRNPLLQ8WVV9 542 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 DEF6Q9H4E7 631 aa17.06■□□□□ 0.32
CCHCR1-201ENST00000376266 MROH7-TTC4A0A0A0MT08 1334 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 N4BP1O75113 896 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 ERLIN1O75477 346 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 HMGB1P09429 215 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 CRKP46108 304 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 RBM5P52756 815 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 KARSQ15046 597 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 MYCBPQ99417 103 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 DAGLAQ9Y4D2 1042 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 MYH2Q9UKX2 1941 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 MBD4O95243 580 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 LDHCP07864 332 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 NCAPGQ9BPX3 1015 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 ARMT1Q9H993 441 aa17.05■□□□□ 0.32
CCHCR1-201ENST00000376266 MAGEB6P1A0A0J9YX57 407 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 GPAA1O43292 621 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 RPS12P25398 132 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 STOX1Q6ZVD7 989 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 SRGAP1Q7Z6B7 1085 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 SLF2Q8IX21 1173 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 LCORLQ8N3X6 602 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 PUF60Q9UHX1 559 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 MAST2Q6P0Q8 1798 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 ADAMTSL1Q8N6G6 1762 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 STX10O60499 249 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 YEATS4O95619 227 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 PFKFB1P16118 471 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 CORO7P57737 925 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 HSP90B2PQ58FF3 399 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 OTUD7BQ6GQQ9 843 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 HHIPL2Q6UWX4 724 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 FAM163AQ96GL9 167 aaPredicted RBP17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 RIOK1Q9BRS2 568 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 CNOT7Q9UIV1 285 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 SERPINA10Q9UK55 444 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 HDAC9Q9UKV0 1011 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 GAKO14976 1311 aa17.04■□□□□ 0.32
CCHCR1-201ENST00000376266 ANKRD65E5RJM6 399 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 POTEB2H3BUK9 544 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 ATP2B1P20020 1258 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 BTDP43251 543 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 MICALL2Q8IY33 904 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 CCDC102AQ96A19 550 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 ANKZF1Q9H8Y5 726 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 DESI2Q9BSY9 194 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 POLR3EQ9NVU0 708 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 FANCLQ9NW38 375 aa17.03■□□□□ 0.32
CCHCR1-201ENST00000376266 GPR75-ASB3A0A0A6YYF3 556 aa17.02■□□□□ 0.32
CCHCR1-201ENST00000376266 CUTAO60888 179 aa17.02■□□□□ 0.32
CCHCR1-201ENST00000376266 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
CCHCR1-201ENST00000376266 ADKP55263 362 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-201ENST00000376266 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-201ENST00000376266 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-201ENST00000376266 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms