RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 OPTNQ96CV9 577 aa26.66■■□□□ 1.86
HLA-C-202ENST00000376237 KLRF2D3W0D1 207 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 BMP3P12645 472 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 SLC4A3P48751 1232 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 TMTC3Q6ZXV5 915 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 OTUD5Q96G74 571 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 C12orf42Q96LP6 360 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 TRPM7Q96QT4 1865 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 HUNKP57058 714 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 HMGN5P82970 282 aaKnown RBP26.65■■□□□ 1.86
HLA-C-202ENST00000376237 ZYXQ15942 572 aaKnown RBP26.65■■□□□ 1.86
HLA-C-202ENST00000376237 CCDC96Q2M329 555 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 STAG2Q8N3U4 1231 aa26.65■■□□□ 1.86
HLA-C-202ENST00000376237 WDR46O15213 610 aaKnown RBP26.64■■□□□ 1.85
HLA-C-202ENST00000376237 NSUN7Q8NE18 718 aaKnown RBP26.64■■□□□ 1.85
HLA-C-202ENST00000376237 SMARCC2Q8TAQ2 1214 aa26.64■■□□□ 1.85
HLA-C-202ENST00000376237 TMOD4Q9NZQ9 345 aa26.64■■□□□ 1.85
HLA-C-202ENST00000376237 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.64■■□□□ 1.85
HLA-C-202ENST00000376237 KCNH4Q9UQ05 1017 aa26.64■■□□□ 1.85
HLA-C-202ENST00000376237 SMC3Q9UQE7 1217 aa26.64■■□□□ 1.85
HLA-C-202ENST00000376237 IRF6O14896 467 aa26.63■■□□□ 1.85
HLA-C-202ENST00000376237 CTDNEP1O95476 244 aa26.63■■□□□ 1.85
HLA-C-202ENST00000376237 SAPCD2Q86UD0 394 aa26.63■■□□□ 1.85
HLA-C-202ENST00000376237 SPICE1Q8N0Z3 855 aa26.63■■□□□ 1.85
HLA-C-202ENST00000376237 CNKSR2Q8WXI2 1034 aa26.63■■□□□ 1.85
HLA-C-202ENST00000376237 CWC22Q9HCG8 908 aaKnown RBP26.63■■□□□ 1.85
HLA-C-202ENST00000376237 EMILIN3Q9NT22 766 aa26.63■■□□□ 1.85
HLA-C-202ENST00000376237 FRMPD2Q68DX3 1309 aaPredicted RBP26.62■■□□□ 1.85
HLA-C-202ENST00000376237 TMEM88BA6NKF7 163 aa26.62■■□□□ 1.85
HLA-C-202ENST00000376237 PLEKHA8P1O95397 391 aa26.62■■□□□ 1.85
HLA-C-202ENST00000376237 GOLGA8HP0CJ92 632 aa26.62■■□□□ 1.85
HLA-C-202ENST00000376237 KIAA1755Q5JYT7 1200 aa26.62■■□□□ 1.85
HLA-C-202ENST00000376237 KCTD1Q719H9 257 aa26.62■■□□□ 1.85
HLA-C-202ENST00000376237 TRIM22Q8IYM9 498 aa26.62■■□□□ 1.85
HLA-C-202ENST00000376237 SRBD1Q8N5C6 995 aaKnown RBP26.62■■□□□ 1.85
HLA-C-202ENST00000376237 SPZ1Q9BXG8 430 aa26.62■■□□□ 1.85
HLA-C-202ENST00000376237 KIF3AQ9Y496 699 aa26.62■■□□□ 1.85
HLA-C-202ENST00000376237 PTPDC1A2A3K4 754 aa26.61■■□□□ 1.85
HLA-C-202ENST00000376237 PLA2G6O60733 806 aa26.61■■□□□ 1.85
HLA-C-202ENST00000376237 HMGCS2P54868 508 aa26.61■■□□□ 1.85
HLA-C-202ENST00000376237 SSRP1Q08945 709 aaKnown RBP26.61■■□□□ 1.85
HLA-C-202ENST00000376237 FUT2Q10981 343 aa26.61■■□□□ 1.85
HLA-C-202ENST00000376237 RASGRP2Q7LDG7 609 aa26.61■■□□□ 1.85
HLA-C-202ENST00000376237 RNF26Q9BY78 433 aaPredicted RBP26.61■■□□□ 1.85
HLA-C-202ENST00000376237 GPCPD1Q9NPB8 672 aa26.61■■□□□ 1.85
HLA-C-202ENST00000376237 RBM27Q9P2N5 1060 aaKnown RBP26.61■■□□□ 1.85
HLA-C-202ENST00000376237 PHIPQ8WWQ0 1821 aa26.61■■□□□ 1.85
HLA-C-202ENST00000376237 ZBTB48P10074 688 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 NBPF11Q86T75 865 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 SPRYD3Q8NCJ5 442 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 FOXD4L1Q9NU39 408 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 ISY1Q9ULR0 285 aaKnown RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 TLL2Q9Y6L7 1015 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 STK36Q9NRP7 1315 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 A0A0G2JLL6 359 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 FMNL1O95466 1100 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 VCAM1P19320 739 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 AKAP17AQ02040 695 aaKnown RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 FAM83BQ5T0W9 1011 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 BTNL9Q6UXG8 535 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 PRRT2Q7Z6L0 340 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 CMTR1Q8N1G2 835 aaKnown RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 CCDC82Q8N4S0 544 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 PROCA1Q8NCQ7 364 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 CHURC1Q8WUH1 139 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 WNK4Q96J92 1243 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 NUP88Q99567 741 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-202ENST00000376237 RIOX1Q9H6W3 641 aa26.6■■□□□ 1.85
HLA-C-202ENST00000376237 TMEM232C9JQI7 657 aa26.59■■□□□ 1.85
HLA-C-202ENST00000376237 STAT2P52630 851 aa26.59■■□□□ 1.85
HLA-C-202ENST00000376237 SNAPC2Q13487 334 aa26.59■■□□□ 1.85
HLA-C-202ENST00000376237 FASTKD5Q7L8L6 764 aaKnown RBP26.59■■□□□ 1.85
HLA-C-202ENST00000376237 FAM160B2Q86V87 743 aa26.59■■□□□ 1.85
HLA-C-202ENST00000376237 PHKBQ93100 1093 aa26.59■■□□□ 1.85
HLA-C-202ENST00000376237 HHIPL1Q96JK4 782 aa26.59■■□□□ 1.85
HLA-C-202ENST00000376237 FEM1BQ9UK73 627 aa26.59■■□□□ 1.85
HLA-C-202ENST00000376237 PRPF3O43395 683 aaKnown RBP26.58■■□□□ 1.85
HLA-C-202ENST00000376237 JAK2O60674 1132 aa26.58■■□□□ 1.85
HLA-C-202ENST00000376237 GJB2P29033 226 aa26.58■■□□□ 1.85
HLA-C-202ENST00000376237 FAM184AQ8NB25 1140 aa26.58■■□□□ 1.85
HLA-C-202ENST00000376237 SLC26A6Q9BXS9 759 aa26.58■■□□□ 1.85
HLA-C-202ENST00000376237 ORC3Q9UBD5 711 aaPredicted RBP26.58■■□□□ 1.85
HLA-C-202ENST00000376237 CNTNAP5Q8WYK1 1306 aa26.57■■□□□ 1.84
HLA-C-202ENST00000376237 IKQ13123 557 aaPredicted RBP26.57■■□□□ 1.84
HLA-C-202ENST00000376237 SPRYD7Q5W111 196 aa26.57■■□□□ 1.84
HLA-C-202ENST00000376237 TTBK2Q6IQ55 1244 aa26.57■■□□□ 1.84
HLA-C-202ENST00000376237 RGMBQ6NW40 437 aa26.57■■□□□ 1.84
HLA-C-202ENST00000376237 WASF1Q92558 559 aa26.57■■□□□ 1.84
HLA-C-202ENST00000376237 UBA5Q9GZZ9 404 aa26.57■■□□□ 1.84
HLA-C-202ENST00000376237 CYTH3O43739 400 aa26.56■■□□□ 1.84
HLA-C-202ENST00000376237 DEXIO95424 95 aa26.56■■□□□ 1.84
HLA-C-202ENST00000376237 GJA5P36382 358 aa26.56■■□□□ 1.84
HLA-C-202ENST00000376237 ZNF157P51786 506 aaPredicted RBP26.56■■□□□ 1.84
HLA-C-202ENST00000376237 GTF2A2P52657 109 aa26.56■■□□□ 1.84
HLA-C-202ENST00000376237 DDX11Q96FC9 970 aa26.56■■□□□ 1.84
HLA-C-202ENST00000376237 RPAP3Q9H6T3 665 aaPredicted RBP26.56■■□□□ 1.84
HLA-C-202ENST00000376237 V9GY48 417 aaPredicted RBP26.56■■□□□ 1.84
HLA-C-202ENST00000376237 PDIA4P13667 645 aaKnown RBP26.55■■□□□ 1.84
HLA-C-202ENST00000376237 ADGRF4Q8IZF3 695 aa26.55■■□□□ 1.84
HLA-C-202ENST00000376237 RRP36Q96EU6 259 aaKnown RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 790.7 ms