RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 BRMS1Q9HCU9 246 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 TAB2Q9NYJ8 693 aa14.04□□□□□ -0.16
TNFSF13B-201ENST00000375887 CALM1P0DP23 149 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 CALM2P0DP24 149 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 CALM3P0DP25 149 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 FECHP22830 423 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 TXLNAP40222 546 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 RCSD1Q6JBY9 416 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 C4orf32Q8N8J7 132 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 MARCH10Q8NA82 808 aaPredicted RBP14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 GOLGA1Q92805 767 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 ARFGAP3Q9NP61 516 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 BSDC1Q9NW68 430 aaPredicted RBP14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 TMEM51Q9NW97 253 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 LIMA1Q9UHB6 759 aaKnown RBP14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 CHMP4BP1P59074 171 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 ST5P78524 1137 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 CAVIN4Q5BKX8 364 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 CTCFLQ8NI51 663 aaPredicted RBP14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 RASGRP4Q8TDF6 673 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 ANKZF1Q9H8Y5 726 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 FAM205AQ6ZU69 1335 aa14.03□□□□□ -0.16
TNFSF13B-201ENST00000375887 ATP8B1O43520 1251 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 KIF5CO60282 957 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 PRDX5P30044 214 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 ARHGAP25P42331 645 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 COPB1P53618 953 aaKnown RBP14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 SMC1AQ14683 1233 aaKnown RBP14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 PFKFB3Q16875 520 aaPredicted RBP14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 TYW1BQ6NUM6 668 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 SRGAP1Q7Z6B7 1085 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 IRF2BP1Q8IU81 584 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 CNGA4Q8IV77 575 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 SLC35F6Q8N357 371 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 NELFBQ8WX92 580 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 GPKOWQ92917 476 aaPredicted RBP eCLIP14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 EEF2KMTQ96G04 330 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 ABHD10Q9NUJ1 306 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 RWDD2AQ9UIY3 292 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 CDC23Q9UJX2 597 aa14.02□□□□□ -0.16
TNFSF13B-201ENST00000375887 MYH13Q9UKX3 1938 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 ORC4O43929 436 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 OAS2P29728 719 aaKnown RBP14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 PRCPP42785 496 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 GYS2P54840 703 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 SF3B3Q15393 1217 aaKnown RBP14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 TCP11X2Q5H9J9 407 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 PNKPQ96T60 521 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 PLIN2Q99541 437 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 CHP1Q99653 195 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 DOT1LQ8TEK3 1739 aa14.02□□□□□ -0.17
TNFSF13B-201ENST00000375887 MYH8P13535 1937 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 PHLPP1O60346 1717 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 ITIH6Q6UXX5 1313 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 TRIM49BA6NDI0 452 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 GTPBP6O43824 516 aaPredicted RBP14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 PMS1P54277 932 aaKnown RBP14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 PAK1Q13153 545 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 LONRF2Q1L5Z9 754 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 STAG2Q8N3U4 1231 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 PP2D1A8MPX8 630 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 KCNJ18B7U540 433 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 RPN1P04843 607 aaKnown RBP14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 KCNJ12Q14500 433 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 DDB1Q16531 1140 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 SLC35G1Q2M3R5 365 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 NAALADL2Q58DX5 795 aa14.01□□□□□ -0.17
TNFSF13B-201ENST00000375887 KIF4BQ2VIQ3 1234 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 ZNF658Q5TYW1 1059 aaPredicted RBP14□□□□□ -0.17
TNFSF13B-201ENST00000375887 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 LRRC15Q8TF66 581 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 NUP88Q99567 741 aaPredicted RBP14□□□□□ -0.17
TNFSF13B-201ENST00000375887 SLF1Q9BQI6 1058 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 SUGCTQ9HAC7 445 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 REXO2Q9Y3B8 237 aaKnown RBP14□□□□□ -0.17
TNFSF13B-201ENST00000375887 STRCQ7RTU9 1775 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 H3BQF6 201 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 USP17L8P0C7I0 530 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 PCP11498 1178 aaKnown RBP14□□□□□ -0.17
TNFSF13B-201ENST00000375887 KRT9P35527 623 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 TRAPPC10P48553 1259 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 TMTC1Q8IUR5 882 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 TMEM60Q9H2L4 133 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 IL17RBQ9NRM6 502 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 TRIM10Q9UDY6 481 aa14□□□□□ -0.17
TNFSF13B-201ENST00000375887 CCDC151A5D8V7 595 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 FAM193AP78312 1265 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 PTF1AQ7RTS3 328 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 NEK11Q8NG66 645 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 CCDC51Q96ER9 411 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 TFR2Q9UP52 801 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 TSPY2A6NKD2 308 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 MAP2K7O14733 419 aa13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 BEND6Q5SZJ8 279 aaPredicted RBP13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 TTF2Q9UNY4 1162 aaKnown RBP13.99□□□□□ -0.17
TNFSF13B-201ENST00000375887 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms