RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 RESP18Q5W5W9 173 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 GBP6Q6ZN66 633 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 PANX2Q96RD6 677 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 STMN4Q9H169 189 aaPredicted RBP18.7■□□□□ 0.58
VARS-215ENST00000375663 TAF6LQ9Y6J9 622 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 CCDC91Q7Z6B0 441 aa18.7■□□□□ 0.58
VARS-215ENST00000375663 MTRF1LQ9UGC7 380 aaKnown RBP18.7■□□□□ 0.58
VARS-215ENST00000375663 MAP3K15Q6ZN16 1313 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 MYO3AQ8NEV4 1616 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 PRKAB2O43741 272 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 TCP1P17987 556 aaKnown RBP18.69■□□□□ 0.58
VARS-215ENST00000375663 CCDC25Q86WR0 208 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 IQCDQ96DY2 449 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 EPSTI1Q96J88 318 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 HYOU1Q9Y4L1 999 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 CCDC174Q6PII3 467 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 TBC1D7Q9P0N9 293 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 CTNNA2P26232 953 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 CCZ1BP86790 482 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 CCZ1P86791 482 aaPredicted RBP18.69■□□□□ 0.58
VARS-215ENST00000375663 SFMBT2Q5VUG0 894 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 NELFCDQ8IXH7 590 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 ANKRD13CQ8N6S4 541 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 TRIM31Q9BZY9 425 aa18.69■□□□□ 0.58
VARS-215ENST00000375663 A0A1W2PRG0 241 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 ZMYND10O75800 440 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 RPS6KA1Q15418 735 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 CALCRLQ16602 461 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 RUFY4Q6ZNE9 571 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 REXO1Q8N1G1 1221 aaKnown RBP18.68■□□□□ 0.58
VARS-215ENST00000375663 GPKOWQ92917 476 aaPredicted RBP eCLIP18.68■□□□□ 0.58
VARS-215ENST00000375663 TUBGCP2Q9BSJ2 902 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 PTPREP23469 700 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 LONP1P36776 959 aaKnown RBP18.68■□□□□ 0.58
VARS-215ENST00000375663 PNMA1Q8ND90 353 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 RRP15Q9Y3B9 282 aaKnown RBP18.68■□□□□ 0.58
VARS-215ENST00000375663 CHGBP05060 677 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 HSPA2P54652 639 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 TOGARAM2Q6ZUX3 1019 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 PAIP2Q9BPZ3 127 aaKnown RBP18.68■□□□□ 0.58
VARS-215ENST00000375663 CCDC87Q9NVE4 849 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 EIF6P56537 245 aaKnown RBP18.68■□□□□ 0.58
VARS-215ENST00000375663 E4F1Q66K89 784 aaPredicted RBP18.68■□□□□ 0.58
VARS-215ENST00000375663 CC2D1AQ6P1N0 951 aaPredicted RBP18.68■□□□□ 0.58
VARS-215ENST00000375663 SAMD15Q9P1V8 674 aa18.68■□□□□ 0.58
VARS-215ENST00000375663 RFX7Q2KHR2 1363 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 CTIFO43310 598 aaKnown RBP18.67■□□□□ 0.58
VARS-215ENST00000375663 GUCY2FP51841 1108 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 RAD51AP2Q09MP3 1159 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 ZNF710Q8N1W2 664 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.67■□□□□ 0.58
VARS-215ENST00000375663 CABS1Q96KC9 395 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 CCDC77Q9BR77 488 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 NRXN1Q9ULB1 1477 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 USP31Q70CQ4 1352 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 CDC25AP30304 524 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 ARHGAP25P42331 645 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 GYS2P54840 703 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 EPC1Q9H2F5 836 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
VARS-215ENST00000375663 SMCO2A6NFE2 343 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 B4DLN1 442 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 GRIPAP1Q4V328 841 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 USPL1Q5W0Q7 1092 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 LZTS2Q9BRK4 669 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 CAPS2Q9BXY5 557 aa18.67■□□□□ 0.58
VARS-215ENST00000375663 PIH1D3Q9NQM4 214 aaKnown RBP18.67■□□□□ 0.58
VARS-215ENST00000375663 EPB41P11171 864 aaKnown RBP18.66■□□□□ 0.58
VARS-215ENST00000375663 ZSCAN20P17040 1043 aaPredicted RBP18.66■□□□□ 0.58
VARS-215ENST00000375663 ATP1A2P50993 1020 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 NUCKS1Q9H1E3 243 aaKnown RBP18.66■□□□□ 0.58
VARS-215ENST00000375663 ABCB6Q9NP58 842 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 ADAM21Q9UKJ8 722 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 RNF40O75150 1001 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 DDAH1O94760 285 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 TECP42680 631 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 CASP8Q14790 479 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 MB21D2Q8IYB1 491 aaPredicted RBP18.66■□□□□ 0.58
VARS-215ENST00000375663 ARPP21Q9UBL0 812 aaPredicted RBP18.66■□□□□ 0.58
VARS-215ENST00000375663 TRAPPC10P48553 1259 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 EXOSC10Q01780 885 aaKnown RBP18.66■□□□□ 0.58
VARS-215ENST00000375663 UIMC1Q96RL1 719 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 NRKQ7Z2Y5 1582 aa18.66■□□□□ 0.58
VARS-215ENST00000375663 ADGRB1O14514 1584 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 MCAMP43121 646 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 BUB1O43683 1085 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 EEF1GP26641 437 aaKnown RBP18.65■□□□□ 0.58
VARS-215ENST00000375663 LIG3P49916 1009 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 CALCOCO2Q13137 446 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 TBC1D10CQ8IV04 446 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 WDR66Q8TBY9 1149 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 PAGE5Q96GU1 130 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 SLC39A2Q9NP94 309 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 HEG1Q9ULI3 1381 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 MFAP3LO75121 409 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 VIMP08670 466 aaKnown RBP18.65■□□□□ 0.58
VARS-215ENST00000375663 ADCY7P51828 1080 aa18.65■□□□□ 0.58
VARS-215ENST00000375663 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms