RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SLC25A27O95847 323 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 PDE4AP27815 886 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 LRRC41Q15345 812 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 TRIM60Q495X7 471 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 CDX2Q99626 313 aaPredicted RBP14.6□□□□□ -0.07
LSM2-208ENST00000375661 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 SEMA6BQ9H3T3 888 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 ARHGEF10LQ9HCE6 1279 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 PRDM5Q9NQX1 630 aaPredicted RBP14.6□□□□□ -0.07
LSM2-208ENST00000375661 PDLIM7Q9NR12 457 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 MYH7P12883 1935 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 UNC80Q8N2C7 3258 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 PDE6AP16499 860 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 MX1P20591 662 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 C9orf50Q5SZB4 431 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 SLC9C2Q5TAH2 1124 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 CENPQQ7L2Z9 268 aaPredicted RBP14.59□□□□□ -0.07
LSM2-208ENST00000375661 NCAPG2Q86XI2 1143 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 BADQ92934 168 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 MAML3Q96JK9 1138 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 PHF24Q9UPV7 400 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 TMX2Q9Y320 296 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 TACC3Q9Y6A5 838 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 TTC41PQ6P2S7 1318 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 ROBO3Q96MS0 1386 aa14.59□□□□□ -0.07
LSM2-208ENST00000375661 WDR46O15213 610 aaKnown RBP14.58□□□□□ -0.08
LSM2-208ENST00000375661 FLOT1O75955 427 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 FCER1AP12319 257 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 ADCYAP1R1P41586 468 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 PDE1AP54750 535 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 PLS1Q14651 629 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 ANO1Q5XXA6 986 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 MAFAQ8NHW3 353 aaPredicted RBP14.58□□□□□ -0.08
LSM2-208ENST00000375661 PI4K2BQ8TCG2 481 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 CCDC17Q96LX7 622 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 HAUS7Q99871 368 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 VCPKMTQ9H867 229 aa14.58□□□□□ -0.08
LSM2-208ENST00000375661 DCP1AQ9NPI6 582 aaPredicted RBP14.58□□□□□ -0.08
LSM2-208ENST00000375661 DIS3Q9Y2L1 958 aaKnown RBP14.58□□□□□ -0.08
LSM2-208ENST00000375661 RARBP10826 455 aa14.57□□□□□ -0.08
LSM2-208ENST00000375661 COPB2P35606 906 aa14.57□□□□□ -0.08
LSM2-208ENST00000375661 FAM47AQ5JRC9 791 aa14.57□□□□□ -0.08
LSM2-208ENST00000375661 PRAMEF19Q5SWL8 479 aa14.57□□□□□ -0.08
LSM2-208ENST00000375661 PLEKHM2Q8IWE5 1019 aa14.57□□□□□ -0.08
LSM2-208ENST00000375661 GPATCH3Q96I76 525 aa14.57□□□□□ -0.08
LSM2-208ENST00000375661 ATP8A2Q9NTI2 1148 aa14.57□□□□□ -0.08
LSM2-208ENST00000375661 ADAMTS5Q9UNA0 930 aa14.57□□□□□ -0.08
LSM2-208ENST00000375661 TCRBV5S4A2TA0A5A2 114 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
LSM2-208ENST00000375661 CLTBP09497 229 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 ICA1Q05084 483 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 KIAA1755Q5JYT7 1200 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 SH3RF1Q7Z6J0 888 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 RNF180Q86T96 592 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 RIOX2Q8IUF8 465 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 SDR42E1Q8WUS8 393 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 TRIM43Q96BQ3 446 aaPredicted RBP14.56□□□□□ -0.08
LSM2-208ENST00000375661 ATG4CQ96DT6 458 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 DNAJC2Q99543 621 aaKnown RBP14.56□□□□□ -0.08
LSM2-208ENST00000375661 OSBPL3Q9H4L5 887 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 XPNPEP3Q9NQH7 507 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 ZNF532Q9HCE3 1301 aa14.56□□□□□ -0.08
LSM2-208ENST00000375661 GOLIM4O00461 696 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 KIAA0355O15063 1070 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 TLE2Q04725 743 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 TMEM132BQ14DG7 1078 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 SIAH1Q8IUQ4 282 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 LCORLQ8N3X6 602 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 FERMT2Q96AC1 680 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 MMP19Q99542 508 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 TINF2Q9BSI4 451 aa14.55□□□□□ -0.08
LSM2-208ENST00000375661 TSEN34Q9BSV6 310 aaKnown RBP14.55□□□□□ -0.08
LSM2-208ENST00000375661 TTYH1Q9H313 450 aaPredicted RBP14.55□□□□□ -0.08
LSM2-208ENST00000375661 LAMA2P24043 3122 aaKnown RBP14.54□□□□□ -0.08
LSM2-208ENST00000375661 ERC2O15083 957 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 AKR1A1P14550 325 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 AKR1B1P15121 316 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 FOSL2P15408 326 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 EVX2Q03828 476 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 KCTD2Q14681 263 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 ZNF792Q3KQV3 632 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 SKAP1Q86WV1 359 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 AMOTL1Q8IY63 956 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 SPICE1Q8N0Z3 855 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 MSL3Q8N5Y2 521 aaKnown RBP14.54□□□□□ -0.08
LSM2-208ENST00000375661 SLC44A5Q8NCS7 719 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 MYLIPQ8WY64 445 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 SYMPKQ92797 1274 aaKnown RBP14.54□□□□□ -0.08
LSM2-208ENST00000375661 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
LSM2-208ENST00000375661 TOX2Q96NM4 488 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 PAG1Q9NWQ8 432 aa14.54□□□□□ -0.08
LSM2-208ENST00000375661 GREB1LQ9C091 1923 aaPredicted RBP14.54□□□□□ -0.08
LSM2-208ENST00000375661 CYP2D6P10635 497 aa14.53□□□□□ -0.08
LSM2-208ENST00000375661 RAG1P15918 1043 aa14.53□□□□□ -0.08
LSM2-208ENST00000375661 NUP133Q8WUM0 1156 aa14.53□□□□□ -0.08
LSM2-208ENST00000375661 DYNLL2Q96FJ2 89 aa14.53□□□□□ -0.08
LSM2-208ENST00000375661 DDRGK1Q96HY6 314 aa14.53□□□□□ -0.08
LSM2-208ENST00000375661 KANSL2Q9H9L4 492 aa14.53□□□□□ -0.08
LSM2-208ENST00000375661 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms