RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PPANQ9NQ55 473 aaKnown RBP12.79□□□□□ -0.36
PTCH1-203ENST00000375274 CEP83Q9Y592 693 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 GNPATO15228 680 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 PPFIA4O75335 1185 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 CYP2E1P05181 493 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-203ENST00000375274 TSNARE1Q96NA8 513 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 NT5C3AQ9H0P0 336 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 NEO1Q92859 1461 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 CEP85LQ5SZL2 805 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 MYOCDQ8IZQ8 938 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 ANKRD13CQ8N6S4 541 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 CAPS2Q9BXY5 557 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 GREM2Q9H772 168 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 ASIC3Q9UHC3 531 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 TRPM1Q7Z4N2 1603 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 ENC1O14682 589 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 ATP2A2P16615 1042 aaKnown RBP12.78□□□□□ -0.36
PTCH1-203ENST00000375274 SLC1A4P43007 532 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 KIFAP3Q92845 792 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 UIMC1Q96RL1 719 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 TRIM7Q9C029 511 aa12.78□□□□□ -0.36
PTCH1-203ENST00000375274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTCH1-203ENST00000375274 M0R2C6 588 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 SLFN14P0C7P3 912 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 IFNAR1P17181 557 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 LONP1P36776 959 aaKnown RBP12.77□□□□□ -0.36
PTCH1-203ENST00000375274 TECP42680 631 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 GYG1P46976 350 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 ATP1A2P50993 1020 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 RBL2Q08999 1139 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 TOB2Q14106 344 aaPredicted RBP12.77□□□□□ -0.36
PTCH1-203ENST00000375274 SMYD4Q8IYR2 804 aaPredicted RBP12.77□□□□□ -0.36
PTCH1-203ENST00000375274 CCDC63Q8NA47 563 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 CNBD1Q8NA66 436 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 TGFBRAP1Q8WUH2 860 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 YEATS2Q9ULM3 1422 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 KCNK3O14649 394 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 OR52Z1P0C646 297 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 CTNNA1P35221 906 aaKnown RBP12.77□□□□□ -0.36
PTCH1-203ENST00000375274 NR5A1Q13285 461 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 TAOK1Q7L7X3 1001 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 ARHGEF25Q86VW2 580 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 HINFPQ9BQA5 517 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 TUBGCP2Q9BSJ2 902 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.36
PTCH1-203ENST00000375274 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.36
PTCH1-203ENST00000375274 GOLGA8KD6RF30 607 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 EXOC3O60645 756 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 GNA14O95837 355 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 KRT5P13647 590 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
PTCH1-203ENST00000375274 GRAMD1CQ8IYS0 662 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 SREK1Q8WXA9 508 aaKnown RBP12.77□□□□□ -0.37
PTCH1-203ENST00000375274 DDX17Q92841 729 aaKnown RBP12.77□□□□□ -0.37
PTCH1-203ENST00000375274 BIN2Q9UBW5 565 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-203ENST00000375274 MAN1B1Q9UKM7 699 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 HGSO14964 777 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-203ENST00000375274 BUB1O43683 1085 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 BIRC3Q13489 604 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 AIFM3Q96NN9 605 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
PTCH1-203ENST00000375274 ARHGEF35A5YM69 484 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 GCNT3O95395 438 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 FMNL1O95466 1100 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 STAT1P42224 750 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 CCDC105Q8IYK2 499 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 LSM14BQ9BX40 385 aaKnown RBP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 RAB17Q9H0T7 212 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 PUS7LQ9H0K6 701 aaKnown RBP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 COBLO75128 1261 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 PNMA6AP0CW24 399 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 XRCC5P13010 732 aaKnown RBP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 TRAPPC10P48553 1259 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 SF3A3Q12874 501 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 VSIG1Q86XK7 387 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 PPFIBP2Q8ND30 876 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 FNBP1Q96RU3 617 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 MRPL44Q9H9J2 332 aaKnown RBP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-203ENST00000375274 AMFRQ9UKV5 643 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 CAPN7Q9Y6W3 813 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 MLH3Q9UHC1 1453 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 DDAH1O94760 285 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 LIG3P49916 1009 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 ATP11AP98196 1134 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 EYA3Q99504 573 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 VEZTQ9HBM0 779 aa12.76□□□□□ -0.37
PTCH1-203ENST00000375274 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms