RNA–Protein interactions for RNA: ENST00000374737.8

VSIG4-201, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG4, Length 1,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-201ENST00000374737 VEGFBP49765 207 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 KIF23Q02241 960 aaPredicted RBP10.56□□□□□ -0.72
VSIG4-201ENST00000374737 MOGSQ13724 837 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 ME3Q16798 604 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 SH3D19Q5HYK7 790 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 TTBK2Q6IQ55 1244 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 CCDC82Q8N4S0 544 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 NECAB1Q8N987 351 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 FANCBQ8NB91 859 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 BRI3BPQ8WY22 251 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 PTPN18Q99952 460 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 TANGO6Q9C0B7 1094 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 UBA5Q9GZZ9 404 aa10.56□□□□□ -0.72
VSIG4-201ENST00000374737 RPAP3Q9H6T3 665 aaPredicted RBP10.56□□□□□ -0.72
VSIG4-201ENST00000374737 NCOA5Q9HCD5 579 aaKnown RBP10.56□□□□□ -0.72
VSIG4-201ENST00000374737 PCNTO95613 3336 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 PHIPQ8WWQ0 1821 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 TMEM232C9JQI7 657 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
VSIG4-201ENST00000374737 BMP3P12645 472 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 ADD1P35611 737 aaKnown RBP10.55□□□□□ -0.72
VSIG4-201ENST00000374737 IKQ13123 557 aaPredicted RBP10.55□□□□□ -0.72
VSIG4-201ENST00000374737 FASTKD5Q7L8L6 764 aaKnown RBP10.55□□□□□ -0.72
VSIG4-201ENST00000374737 LPAR1Q92633 364 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 FBXO28Q9NVF7 368 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 LIMCH1Q9UPQ0 1083 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 HPS5Q9UPZ3 1129 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
VSIG4-201ENST00000374737 MYH4Q9Y623 1939 aa10.55□□□□□ -0.72
VSIG4-201ENST00000374737 GOLGA8AA7E2F4 631 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 BTBD19C9JJ37 291 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 DDAH1O94760 285 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 CDC27P30260 824 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
VSIG4-201ENST00000374737 EVCP57679 992 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 GPAT2Q6NUI2 795 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 FAM43AQ8N2R8 423 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 CTCFLQ8NI51 663 aaPredicted RBP10.54□□□□□ -0.72
VSIG4-201ENST00000374737 PIBF1Q8WXW3 757 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 ZNF274Q96GC6 653 aaPredicted RBP10.54□□□□□ -0.72
VSIG4-201ENST00000374737 GMCL1Q96IK5 515 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 C12orf42Q96LP6 360 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 SLKQ9H2G2 1235 aaPredicted RBP10.54□□□□□ -0.72
VSIG4-201ENST00000374737 VAT1LQ9HCJ6 419 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 MAD2L2Q9UI95 211 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 SYNPO2Q9UMS6 1093 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 MANSC4A6NHS7 340 aaPredicted RBP10.54□□□□□ -0.72
VSIG4-201ENST00000374737 KLRF2D3W0D1 207 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 WDR46O15213 610 aaKnown RBP10.54□□□□□ -0.72
VSIG4-201ENST00000374737 FLOT1O75955 427 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 PLEKHA8P1O95397 391 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 CALM1P0DP23 149 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 CALM2P0DP24 149 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 CALM3P0DP25 149 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 SNHG28P0DPA3 235 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 SNAP25P60880 206 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 ZNF543Q08ER8 600 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 SCRN1Q12765 414 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 NOGQ13253 232 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 GRM4Q14833 912 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 NBPF11Q86T75 865 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
VSIG4-201ENST00000374737 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 KIFC2Q96AC6 838 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
VSIG4-201ENST00000374737 AGTPBP1Q9UPW5 1226 aa10.54□□□□□ -0.72
VSIG4-201ENST00000374737 PALM3A6NDB9 673 aaPredicted RBP10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L15C9J2P7 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L13C9JLJ4 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L11C9JVI0 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L18D6R9N7 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L22D6RA61 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L17D6RBQ6 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L19D6RCP7 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L20D6RJB6 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 PDHXO00330 501 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 IGF2BP3O00425 579 aaKnown RBP eCLIP10.53□□□□□ -0.72
VSIG4-201ENST00000374737 DHX16O60231 1041 aaKnown RBP10.53□□□□□ -0.72
VSIG4-201ENST00000374737 CYP2C8P10632 490 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 USP17L24Q0WX57 530 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 RTN1Q16799 776 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 CATSPERGQ6ZRH7 1159 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 TMX3Q96JJ7 454 aa10.53□□□□□ -0.72
VSIG4-201ENST00000374737 hCG_1642624A0A1W2PR95 340 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.73
VSIG4-201ENST00000374737 PEX10O60683 326 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 PFKFB2O60825 505 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 KIF5BP33176 963 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 STAT2P52630 851 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 ASPRV1Q53RT3 343 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 GPATCH4Q5T3I0 446 aaKnown RBP10.52□□□□□ -0.73
VSIG4-201ENST00000374737 IFNL1Q8IU54 200 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 SRBD1Q8N5C6 995 aaKnown RBP10.52□□□□□ -0.73
VSIG4-201ENST00000374737 P2RX7Q99572 595 aaKnown RBP10.52□□□□□ -0.73
VSIG4-201ENST00000374737 ASCC2Q9H1I8 757 aaPredicted RBP10.52□□□□□ -0.73
VSIG4-201ENST00000374737 CEP350Q5VT06 3117 aa10.52□□□□□ -0.73
VSIG4-201ENST00000374737 HOXA7P31268 230 aaPredicted RBP10.51□□□□□ -0.73
VSIG4-201ENST00000374737 INHBEP58166 350 aa10.51□□□□□ -0.73
VSIG4-201ENST00000374737 IRX3P78415 501 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms