RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 ZNF112Q9UJU3 913 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 TRIOBPQ9H2D6 2365 aa20.45■□□□□ 0.86
PFDN6-201ENST00000374606 ZBTB43O43298 467 aa20.45■□□□□ 0.86
PFDN6-201ENST00000374606 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
PFDN6-201ENST00000374606 INPP5BP32019 993 aa20.45■□□□□ 0.86
PFDN6-201ENST00000374606 GUCY1A2P33402 732 aa20.45■□□□□ 0.86
PFDN6-201ENST00000374606 NOVP48745 357 aa20.45■□□□□ 0.86
PFDN6-201ENST00000374606 JAG1P78504 1218 aa20.45■□□□□ 0.86
PFDN6-201ENST00000374606 STK3Q13188 491 aa20.45■□□□□ 0.86
PFDN6-201ENST00000374606 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.45■□□□□ 0.86
PFDN6-201ENST00000374606 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
PFDN6-201ENST00000374606 SLKQ9H2G2 1235 aaPredicted RBP20.45■□□□□ 0.86
PFDN6-201ENST00000374606 DDAH1O94760 285 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 HSP90AA1P07900 732 aaKnown RBP20.44■□□□□ 0.86
PFDN6-201ENST00000374606 PDIA3P30101 505 aaKnown RBP20.44■□□□□ 0.86
PFDN6-201ENST00000374606 RCAN1P53805 252 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 MAP3K9P80192 1104 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 ATP2B2Q01814 1243 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 VGLL4Q14135 290 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 RAB11FIP4Q86YS3 637 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 SCYL3Q8IZE3 742 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 PNMA1Q8ND90 353 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.44■□□□□ 0.862e-8■■□□□ 14.5
PFDN6-201ENST00000374606 CNKSR2Q8WXI2 1034 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 TMEM47Q9BQJ4 181 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 MYL10Q9BUA6 226 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 NYAP2Q9P242 653 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 CSADQ9Y600 493 aa20.44■□□□□ 0.86
PFDN6-201ENST00000374606 GOLGA8AA7E2F4 631 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 PFKFB2O60825 505 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 CALM1P0DP23 149 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 CALM2P0DP24 149 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 CALM3P0DP25 149 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 EEF2P13639 858 aaKnown RBP20.43■□□□□ 0.86
PFDN6-201ENST00000374606 METAP2P50579 478 aaKnown RBP eCLIP20.43■□□□□ 0.86
PFDN6-201ENST00000374606 FAM43AQ8N2R8 423 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 NECAB1Q8N987 351 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 NUP133Q8WUM0 1156 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 GTF3C6Q969F1 213 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 ARHGEF10LQ9HCE6 1279 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 CLIP2Q9UDT6 1046 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 NID2Q14112 1375 aa20.43■□□□□ 0.86
PFDN6-201ENST00000374606 RXRAP19793 462 aa20.42■□□□□ 0.86
PFDN6-201ENST00000374606 SLC4A3P48751 1232 aa20.42■□□□□ 0.86
PFDN6-201ENST00000374606 CUL4AQ13619 759 aa20.42■□□□□ 0.86
PFDN6-201ENST00000374606 KIF22Q14807 665 aa20.42■□□□□ 0.86
PFDN6-201ENST00000374606 NOL9Q5SY16 702 aaKnown RBP20.42■□□□□ 0.86
PFDN6-201ENST00000374606 CCDC83Q8IWF9 413 aa20.42■□□□□ 0.86
PFDN6-201ENST00000374606 LRRC47Q8N1G4 583 aaKnown RBP20.42■□□□□ 0.86
PFDN6-201ENST00000374606 OTUD5Q96G74 571 aa20.42■□□□□ 0.86
PFDN6-201ENST00000374606 PICK1Q9NRD5 415 aa20.42■□□□□ 0.86
PFDN6-201ENST00000374606 H0YGN5 161 aa20.41■□□□□ 0.86
PFDN6-201ENST00000374606 MYCP01106 439 aaPredicted RBP20.41■□□□□ 0.86
PFDN6-201ENST00000374606 CCT2P78371 535 aaKnown RBP20.41■□□□□ 0.86
PFDN6-201ENST00000374606 SCRN1Q12765 414 aa20.41■□□□□ 0.86
PFDN6-201ENST00000374606 RTN1Q16799 776 aa20.41■□□□□ 0.86
PFDN6-201ENST00000374606 CCDC144CPQ8IYA2 1237 aa20.41■□□□□ 0.86
PFDN6-201ENST00000374606 ZKSCAN4Q969J2 545 aaPredicted RBP20.41■□□□□ 0.86
PFDN6-201ENST00000374606 CHMP4CQ96CF2 233 aa20.41■□□□□ 0.86
PFDN6-201ENST00000374606 SH2D4AQ9H788 454 aa20.41■□□□□ 0.86
PFDN6-201ENST00000374606 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.41■□□□□ 0.86
PFDN6-201ENST00000374606 SYNPO2Q9UMS6 1093 aa20.41■□□□□ 0.86
PFDN6-201ENST00000374606 DHX16O60231 1041 aaKnown RBP20.4■□□□□ 0.86
PFDN6-201ENST00000374606 ST3GAL1Q11201 340 aa20.4■□□□□ 0.86
PFDN6-201ENST00000374606 TROAPQ12815 778 aa20.4■□□□□ 0.86
PFDN6-201ENST00000374606 CTCFLQ8NI51 663 aaPredicted RBP20.4■□□□□ 0.86
PFDN6-201ENST00000374606 SH3TC2Q8TF17 1288 aa20.4■□□□□ 0.86
PFDN6-201ENST00000374606 NCOA5Q9HCD5 579 aaKnown RBP20.4■□□□□ 0.86
PFDN6-201ENST00000374606 ZCCHC17Q9NP64 241 aaKnown RBP20.4■□□□□ 0.86
PFDN6-201ENST00000374606 SPDYE5A6NIY4 337 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 USP17L5A8MUK1 530 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 TLR2O60603 784 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 CETPP11597 493 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 MKL1Q969V6 931 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 FEZ1Q99689 392 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 AS3MTQ9HBK9 375 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 MTMR7Q9Y216 660 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.39■□□□□ 0.85
PFDN6-201ENST00000374606 ZSWIM8A7E2V4 1837 aa20.39■□□□□ 0.85
PFDN6-201ENST00000374606 CCDC196A0A1B0GTZ2 297 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 CPLX1O14810 134 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 GNRH1P01148 92 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 KIF5BP33176 963 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 PRMT2P55345 433 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 LACTBP83111 547 aaPredicted RBP20.38■□□□□ 0.85
PFDN6-201ENST00000374606 GRM4Q14833 912 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 PPP2R5BQ15173 497 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 CPLX2Q6PUV4 134 aaKnown RBP20.38■□□□□ 0.85
PFDN6-201ENST00000374606 CCDC84Q86UT8 332 aaPredicted RBP20.38■□□□□ 0.85
PFDN6-201ENST00000374606 SIAH1Q8IUQ4 282 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 FANCBQ8NB91 859 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 SPRYD3Q8NCJ5 442 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 INTS4Q96HW7 963 aaKnown RBP20.38■□□□□ 0.85
PFDN6-201ENST00000374606 MAP3K14Q99558 947 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 ARHGAP39Q9C0H5 1083 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 FOXD4L1Q9NU39 408 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 RBM28Q9NW13 759 aaKnown RBP20.38■□□□□ 0.85
PFDN6-201ENST00000374606 SNCAIPQ9Y6H5 919 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 PHIPQ8WWQ0 1821 aa20.38■□□□□ 0.85
PFDN6-201ENST00000374606 PTPRAP18433 802 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms