RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 FECHP22830 423 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 CYP2C19P33261 490 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 SMC1AQ14683 1233 aaKnown RBP12.88□□□□□ -0.35
PTPN20-204ENST00000374346 KRT31Q15323 416 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 SF3B3Q15393 1217 aaKnown RBP12.88□□□□□ -0.35
PTPN20-204ENST00000374346 SRBD1Q8N5C6 995 aaKnown RBP12.88□□□□□ -0.35
PTPN20-204ENST00000374346 SH3GLB2Q9NR46 395 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 ABHD10Q9NUJ1 306 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 XDHP47989 1333 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 LAMB1P07942 1786 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 H7C1D1 291 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 MYL1P05976 194 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 GTF2E1P29083 439 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-204ENST00000374346 STAT6P42226 847 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 SEMA3FQ13275 785 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 STIM1Q13586 685 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 KCNJ12Q14500 433 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 NPY5RQ15761 445 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 TSR1Q2NL82 804 aaKnown RBP12.88□□□□□ -0.35
PTPN20-204ENST00000374346 TCP11X2Q5H9J9 407 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 PDXDC2PQ6P474 469 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 NELFBQ8WX92 580 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 BLZF1Q9H2G9 400 aa12.88□□□□□ -0.35
PTPN20-204ENST00000374346 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPN20-204ENST00000374346 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
PTPN20-204ENST00000374346 ERICH4A6NGS2 130 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 RPN1P04843 607 aaKnown RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 COPB1P53618 953 aaKnown RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 WWC2Q6AWC2 1192 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 RASSF8Q8NHQ8 419 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 HNRNPLLQ8WVV9 542 aaKnown RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 NSUN4Q96CB9 384 aaKnown RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 FAM84BQ96KN1 310 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 NAPGQ99747 312 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 IRX2Q9BZI1 471 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 MINPP1Q9UNW1 487 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 THRAP3Q9Y2W1 955 aaKnown RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 SCN7AQ01118 1682 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 POLR3GO15318 223 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 FXR1P51114 621 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 TXLNBQ8N3L3 684 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 STAMQ92783 540 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 SMARCC1Q92922 1105 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 VPS16Q9H269 839 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 EPC1Q9H2F5 836 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 KAT14Q9H8E8 782 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 DCP1AQ9NPI6 582 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-204ENST00000374346 STRCQ7RTU9 1775 aa12.87□□□□□ -0.35
PTPN20-204ENST00000374346 COL1A1P02452 1464 aaPredicted RBP12.86□□□□□ -0.35
PTPN20-204ENST00000374346 MYH14Q7Z406 1995 aaKnown RBP12.86□□□□□ -0.35
PTPN20-204ENST00000374346 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
PTPN20-204ENST00000374346 OAS2P29728 719 aaKnown RBP12.86□□□□□ -0.35
PTPN20-204ENST00000374346 GNAQP50148 359 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 SBK1Q52WX2 424 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 CCDC178Q5BJE1 867 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 BLIDQ8IZY5 108 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 UBXN6Q9BZV1 441 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 GBP3Q9H0R5 595 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 CTAGE15A4D2H0 777 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 WNT7AO00755 349 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 CTAGE8P0CG41 777 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 MECOMQ03112 1051 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 UBXN1Q04323 297 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 ERFEQ4G0M1 354 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 DTHD1Q6ZMT9 781 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 CTAGE6Q86UF2 777 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 CTAGE4Q8IX94 777 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 CCDC148Q8NFR7 591 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 PCDHA4Q9UN74 947 aa12.86□□□□□ -0.35
PTPN20-204ENST00000374346 BAZ2BQ9UIF8 2168 aaKnown RBP12.86□□□□□ -0.35
PTPN20-204ENST00000374346 CCDC194A0A1B0GVG4 234 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 SMIM22K7EJ46 135 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 EEF1GP26641 437 aaKnown RBP12.85□□□□□ -0.35
PTPN20-204ENST00000374346 KRT9P35527 623 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 ITPK1Q13572 414 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 FAM47AQ5JRC9 791 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 GALNT17Q6IS24 598 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 HDXQ7Z353 690 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 FBXO33Q7Z6M2 555 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 AMOTL1Q8IY63 956 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 ACSBG1Q96GR2 724 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 DISC1Q9NRI5 854 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.85□□□□□ -0.35
PTPN20-204ENST00000374346 MAGEC2Q9UBF1 373 aaPredicted RBP12.85□□□□□ -0.35
PTPN20-204ENST00000374346 PUF60Q9UHX1 559 aaKnown RBP12.85□□□□□ -0.35
PTPN20-204ENST00000374346 LAD1O00515 517 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 SASH3O75995 380 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 HIBADHP31937 336 aaKnown RBP12.85□□□□□ -0.35
PTPN20-204ENST00000374346 SPTY2D1Q68D10 685 aaPredicted RBP12.85□□□□□ -0.35
PTPN20-204ENST00000374346 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 SLC35F6Q8N357 371 aa12.85□□□□□ -0.35
PTPN20-204ENST00000374346 CCDC47Q96A33 483 aaKnown RBP12.85□□□□□ -0.35
PTPN20-204ENST00000374346 TAB2Q9NYJ8 693 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms