RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 STX17P56962 302 aa19.52■□□□□ 0.72
LDLRAP1-201ENST00000374338 CHMP4BP1P59074 171 aa19.52■□□□□ 0.72
LDLRAP1-201ENST00000374338 ZNF174Q15697 407 aa19.52■□□□□ 0.72
LDLRAP1-201ENST00000374338 RASGRP2Q7LDG7 609 aa19.52■□□□□ 0.72
LDLRAP1-201ENST00000374338 BPIFA3Q9BQP9 254 aa19.52■□□□□ 0.72
LDLRAP1-201ENST00000374338 GNPATO15228 680 aa19.52■□□□□ 0.71
LDLRAP1-201ENST00000374338 IFNAR1P17181 557 aa19.52■□□□□ 0.71
LDLRAP1-201ENST00000374338 SAFBQ15424 915 aaKnown RBP eCLIP19.52■□□□□ 0.71
LDLRAP1-201ENST00000374338 STAG1Q8WVM7 1258 aa19.52■□□□□ 0.71
LDLRAP1-201ENST00000374338 CDC5LQ99459 802 aaKnown RBP19.52■□□□□ 0.71
LDLRAP1-201ENST00000374338 RABEP2Q9H5N1 569 aa19.52■□□□□ 0.71
LDLRAP1-201ENST00000374338 BAZ2AQ9UIF9 1905 aaKnown RBP19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 CASP8Q14790 479 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 PARP10Q53GL7 1025 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 VSTM4Q8IW00 320 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 CSRNP2Q9H175 543 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 C4AP0C0L4 1744 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 C4BP0C0L5 1744 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 ERLIN1O75477 346 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 USP8P40818 1118 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 CAVIN4Q5BKX8 364 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 CPLX3Q8WVH0 158 aa19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 RIOK1Q9BRS2 568 aaKnown RBP19.51■□□□□ 0.71
LDLRAP1-201ENST00000374338 MECOMQ03112 1051 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 ALX1Q15699 326 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 IFIT1BQ5T764 474 aaKnown RBP19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 RESP18Q5W5W9 173 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 SRGAP1Q7Z6B7 1085 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 KRI1Q8N9T8 703 aaKnown RBP19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 NGLY1Q96IV0 654 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 CNNM2Q9H8M5 875 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 ATRNO75882 1429 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 SCP2P22307 547 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 FMR1Q06787 632 aaKnown RBP eCLIP19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 NBPF5PQ86XG9 351 aaPredicted RBP19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 GDAP1L1Q96MZ0 367 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 CPVLQ9H3G5 476 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 HPSEQ9Y251 543 aa19.5■□□□□ 0.71
LDLRAP1-201ENST00000374338 MYH2Q9UKX2 1941 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 A0A087X0B3 334 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 SOWAHDA6NJG2 315 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 ARHGAP6O43182 974 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 ABL1P00519 1130 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 GRIK5Q16478 980 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 LRCH2Q5VUJ6 765 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 MSANTD4Q8NCY6 345 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 DYNLL2Q96FJ2 89 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 CUTAO60888 179 aa19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 AKAP17AQ02040 695 aaKnown RBP19.49■□□□□ 0.71
LDLRAP1-201ENST00000374338 GOLGA6L9A6NEM1 432 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 MYL5Q02045 173 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 PPP2R5AQ15172 486 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 DIXDC1Q155Q3 683 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 WDR19Q8NEZ3 1342 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 RASGRP4Q8TDF6 673 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 ESR2Q92731 530 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 ZSCAN10Q96SZ4 725 aaPredicted RBP19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 POTEB2H3BUK9 544 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 PPP1R12AO14974 1030 aaPredicted RBP19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 SGSM3Q96HU1 749 aa19.48■□□□□ 0.71
LDLRAP1-201ENST00000374338 ROBO1Q9Y6N7 1651 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 JMYQ8N9B5 988 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 TC2NQ8N9U0 490 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 SLC44A5Q8NCS7 719 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 JPH2Q9BR39 696 aaPredicted RBP19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 SAMSN1Q9NSI8 373 aaKnown RBP19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 FBXO2Q9UK22 296 aaPredicted RBP19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 PPP6R2O75170 966 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 SEC23AQ15436 765 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 PKN1Q16512 942 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 TICAM2Q86XR7 235 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 RNF217Q8TC41 542 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 AFAP1L1Q8TED9 768 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 HINFPQ9BQA5 517 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 ZNF652Q9Y2D9 606 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 FAM169AQ9Y6X4 670 aa19.47■□□□□ 0.71
LDLRAP1-201ENST00000374338 LRRIQ3A6PVS8 624 aaPredicted RBP19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 C21orf2O43822 256 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 RNF40O75150 1001 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 RPS8P62241 208 aaKnown RBP19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 VSNL1P62760 191 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 GPKOWQ92917 476 aaPredicted RBP eCLIP19.46■□□□□ 0.712e-6■■■□□ 15.9
LDLRAP1-201ENST00000374338 BLZF1Q9H2G9 400 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 GNL3LQ9NVN8 582 aaKnown RBP19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 SPATA31A5Q5VU36 1347 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 SPATA31A7Q8IWB4 1347 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 NHSL1Q5SYE7 1610 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 DEXIO95424 95 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 GBP6Q6ZN66 633 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 RIN2Q8WYP3 895 aaPredicted RBP19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 PLIN2Q99541 437 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 MAN1B1Q9UKM7 699 aa19.46■□□□□ 0.71
LDLRAP1-201ENST00000374338 SETDB2Q96T68 719 aa19.45■□□□□ 0.7
LDLRAP1-201ENST00000374338 MCM9Q9NXL9 1143 aa19.45■□□□□ 0.7
LDLRAP1-201ENST00000374338 SAP30BPQ9UHR5 308 aaKnown RBP19.45■□□□□ 0.7
LDLRAP1-201ENST00000374338 MAPK8IP1Q9UQF2 711 aa19.45■□□□□ 0.7
LDLRAP1-201ENST00000374338 PNPLA7Q6ZV29 1317 aa19.45■□□□□ 0.7
LDLRAP1-201ENST00000374338 ANKRD36CQ5JPF3 1778 aa19.45■□□□□ 0.7
LDLRAP1-201ENST00000374338 COL16A1Q07092 1604 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms