RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 SLC1A4P43007 532 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 FSTL1Q12841 308 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 MTMR2Q13614 643 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 KIAA1755Q5JYT7 1200 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 GPATCH4Q5T3I0 446 aaKnown RBP17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 STAG2Q8N3U4 1231 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 SMARCC2Q8TAQ2 1214 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 LPAR1Q92633 364 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 LZTS2Q9BRK4 669 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 TRIM75PA6NK02 468 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 C19orf81C9J6K1 198 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 RAD21O60216 631 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 PLEKHA8P1O95397 391 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 FUT2Q10981 343 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 PPIL2Q13356 520 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 C12orf42Q96LP6 360 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 GOLGA8HP0CJ92 632 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 BMP3P12645 472 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 SMARCA1P28370 1054 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 ZYXQ15942 572 aaKnown RBP17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 CCDC96Q2M329 555 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 NBPF11Q86T75 865 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 SRBD1Q8N5C6 995 aaKnown RBP17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 OPTNQ96CV9 577 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 OTUD5Q96G74 571 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 KCNH4Q9UQ05 1017 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 SMC3Q9UQE7 1217 aa17.01■□□□□ 0.31
SMPDL3B-201ENST00000373888 FRMPD2Q68DX3 1309 aaPredicted RBP17■□□□□ 0.31
SMPDL3B-201ENST00000373888 KLRF2D3W0D1 207 aa17■□□□□ 0.31
SMPDL3B-201ENST00000373888 CXCL11O14625 94 aa17■□□□□ 0.31
SMPDL3B-201ENST00000373888 WDR46O15213 610 aaKnown RBP17■□□□□ 0.31
SMPDL3B-201ENST00000373888 JAK2O60674 1132 aa17■□□□□ 0.31
SMPDL3B-201ENST00000373888 KCTD1Q719H9 257 aa17■□□□□ 0.31
SMPDL3B-201ENST00000373888 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
SMPDL3B-201ENST00000373888 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
SMPDL3B-201ENST00000373888 EMILIN3Q9NT22 766 aa17■□□□□ 0.31
SMPDL3B-201ENST00000373888 CNTNAP5Q8WYK1 1306 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 STK36Q9NRP7 1315 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 IRF6O14896 467 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 FMNL1O95466 1100 aaPredicted RBP16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 VCAM1P19320 739 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 GJB2P29033 226 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 DDIT3P35638 169 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 HMGCS2P54868 508 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 PHKBQ93100 1093 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 NUP88Q99567 741 aaPredicted RBP16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 RNF26Q9BY78 433 aaPredicted RBP16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 GPCPD1Q9NPB8 672 aa16.99■□□□□ 0.31
SMPDL3B-201ENST00000373888 A0A0G2JLL6 359 aaPredicted RBP16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 CYTH3O43739 400 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 PLA2G6O60733 806 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 GJA5P36382 358 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 HUNKP57058 714 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 TTBK2Q6IQ55 1244 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 BTNL9Q6UXG8 535 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 PRRT2Q7Z6L0 340 aaPredicted RBP16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 SAPCD2Q86UD0 394 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 RIOX1Q9H6W3 641 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 PTPRFP10586 1907 aa16.98■□□□□ 0.31
SMPDL3B-201ENST00000373888 PRPF3O43395 683 aaKnown RBP16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 DTNBO60941 627 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 FDPSP14324 419 aaKnown RBP16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 SSRP1Q08945 709 aaKnown RBP16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 DGKZQ13574 1117 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 TRIM22Q8IYM9 498 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 CCDC82Q8N4S0 544 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 DDX11Q96FC9 970 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 WNK4Q96J92 1243 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 SLC26A6Q9BXS9 759 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 TMOD4Q9NZQ9 345 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 TLL2Q9Y6L7 1015 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 LOC285556D6RIA3 1793 aa16.97■□□□□ 0.31
SMPDL3B-201ENST00000373888 TMEM232C9JQI7 657 aa16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 PPFIA3O75145 1194 aa16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 STAT2P52630 851 aa16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 PROCA1Q8NCQ7 364 aaPredicted RBP16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 UBA5Q9GZZ9 404 aa16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 CPVLQ9H3G5 476 aa16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 RBM27Q9P2N5 1060 aaKnown RBP16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 ORC3Q9UBD5 711 aaPredicted RBP16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 KIF3AQ9Y496 699 aa16.96■□□□□ 0.31
SMPDL3B-201ENST00000373888 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.3
SMPDL3B-201ENST00000373888 DEXIO95424 95 aa16.96■□□□□ 0.3
SMPDL3B-201ENST00000373888 ZBTB48P10074 688 aaPredicted RBP16.96■□□□□ 0.3
SMPDL3B-201ENST00000373888 RPAP3Q9H6T3 665 aaPredicted RBP16.96■□□□□ 0.3
SMPDL3B-201ENST00000373888 FEM1BQ9UK73 627 aa16.96■□□□□ 0.3
SMPDL3B-201ENST00000373888 ISY1Q9ULR0 285 aaKnown RBP16.96■□□□□ 0.3
SMPDL3B-201ENST00000373888 SLC16A2P36021 539 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms